Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1961 ATGGGTTCCACGGCCATGGCTTCCTTTTGGTTCCTTCTTCTTCTGCTACCGTCAGTTATGGCAAAGAAAACTTACATTATTCACATGAGACACCATGAAAAGCCTTCCATCTACCCTACCTACCATGACTGGTACTCTGCAAGTCTCCAGTCTCTTTCCACTTCTTCTGGCTCAGATTCTCTGCTTTATACCTATACTACTGCTTACAATGGCTTCGCTGCTTCCCTCGATCCCTCTGAGGCCGAGGCTCTCCGCAGATCCGATTCCGTTCTAGGCGTATACGAAGACACCGTCTACACTCTCCACACCACTCGCACACCCGAGTTCCTGGGTCTCGAAACTCAATTTGGCTTATGGGAAGGCCATAACACTCTGGACCTCGAACAAGCTTCTCACGATGTCATCATTGGGATTCTCGACACAGGGATTTGGCCTGAATCGAAGAGCTTCGGCGATTCGGAAATGCCCGAGATCCCGACCCGGTGGCGCGGCGAGTGCGAGGCGGGTCCCGATTTCAGCAAAACGCTCTGCAACAAAAAGCTCATTGGGGCTCGCAGCTTCTCCAAAGGCTTCCACATGGCTTCCGGTGGTAACTATATGAAGAACGACAAAGAAACTGTATCACCTCGTGACCAAGACGGCCATGGCACTCACACTGCAAGTACAGCAGCGGGGTCCCACGTTGCCAACGCTAGCCTCCTTGGTTATGCTAGCGGTACGGCCCGTGGAATGGCCCCACAAGCGCGTGTCGCTACATACAAGGTTTGCTGGAGCACGGGTTGCTTTGGGTCGGACATACTTGCGGGCATGGATCGGGCGATCCAGGACGGCGTGGATGTGCTCTCGCTCTCTCTCGGTGGTGGTTCCGCCCCTTACTTCCGCGACACGATCGCAATAGGAGCCTTCGCAGCGATGGAGAGGGGCATCTTCGTTTCGTGCTCGGCTGGGAATAGCGGACCCAGCAGGGCGTCACTGGCCAATGTAGCTCCGTGGATCATGACCGTCGGTGCCGGAACGCTGGATCGAGATTTTCCGGCTTACGTTTCGTTGGGGAATAAGAAACAGTTCAACGGCGTTTCGCTTTACAGTGGAAAAGGAATGGGGGACCGGCCAGTGGGTTTGGTTTACAACAAGGGGTCCAACACATCGACCAGCATGTGCATGCCCGGTTCGCTTGACCCGGCGGTGGTACGCGGGAAAGTGGTGATTTGTGATAGGGGAATTAACGCACGTGTGGAGAAAGGTGAGGTTGTGCGTGACGCCGGCGGGGTGGGTATGATACTGGCGAATACGGTGGCCAGCGGCGAGGAATTGGTGGCGGACAGCCACTTGCTACCGGCAGTGGCGGTTGGGAGAACTGTGGGCGATGAGATTAGAGAGTATGTACGGTCTGATCCAAACCCAACGGCTACGTTGAAGTTCGGTGGGACCGTGTTGAACGTGACGCCATCGCCTGTAGTGGCAGCGTTCAGTTCTCGAGGGCCTAATCTGGTGACTCCGCAGATATTGAAACCAGACGTGATTGGGCCTGGGGTTAATATCTTAGCTGGTTGGTCTGAGGCTATTGGGCCGTCTGGACTGTCTCAGGATACTCGTAAAACCCAGTTCAACATCATGTCAGGGACGTCCATGTCTTGTCCACATATAAGTGGGTTAGCCGGATTACTAAAAGCAGCTCATCCAGATTGGAGCCCAAGTGCAATCAAATCAGCGTTAATGACAACCGCCTACACCCACGACAACACCAAATCCCCTCTCAGGGACGCCGCCGGAGGATCCTTCTCCACCCCATGGGCCCACGGCGCCGGCCATGTCAACCCCCAGAAAGCCCTCTCTCCCGGCCTCATCTACGACGTATCCACCTCCGACTACGTGGCATTCTTGTGCTCCCTGGACTACAACCCACAGCACCTCCAACTCATCGTCAAGCACCCCAACATTAGCTGCTCCAGAAAGTTTTCGGACCCTGGTCAACTGAACTACCCATCGTTCTCCGTCGTGTTTGGGAGTAAGAGGGTCGTGAGATACACGCGTACGTTGACTAATGTTGGGGAGACGGGGTCCACCTATGACGTGGCTGTGACCGGGCCGTTATCCTTGGTGAGAGTATCGGTCAAACCCAGGAAGCTTGTGTTTGGGAAAGTGGGGGAAAATCAGCGGTACACTGTGACCTTTGTGTCGAAGAAAGGTGCTGATAATAGTTCGGTTAGGTCCGAGTTTGGTAGCATTGTGTGGAGCAATGCGCAGCACCAAGTTACGAGCCCAATTGCTTTTGCTTGGACTGAATTAGACTTGTGA 2298 0.544 MGSTAMASFWFLLLLLPSVMAKKTYIIHMRHHEKPSIYPTYHDWYSASLQSLSTSSGSDSLLYTYTTAYNGFAASLDPSEAEALRRSDSVLGVYEDTVYTLHTTRTPEFLGLETQFGLWEGHNTLDLEQASHDVIIGILDTGIWPESKSFGDSEMPEIPTRWRGECEAGPDFSKTLCNKKLIGARSFSKGFHMASGGNYMKNDKETVSPRDQDGHGTHTASTAAGSHVANASLLGYASGTARGMAPQARVATYKVCWSTGCFGSDILAGMDRAIQDGVDVLSLSLGGGSAPYFRDTIAIGAFAAMERGIFVSCSAGNSGPSRASLANVAPWIMTVGAGTLDRDFPAYVSLGNKKQFNGVSLYSGKGMGDRPVGLVYNKGSNTSTSMCMPGSLDPAVVRGKVVICDRGINARVEKGEVVRDAGGVGMILANTVASGEELVADSHLLPAVAVGRTVGDEIREYVRSDPNPTATLKFGGTVLNVTPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNILAGWSEAIGPSGLSQDTRKTQFNIMSGTSMSCPHISGLAGLLKAAHPDWSPSAIKSALMTTAYTHDNTKSPLRDAAGGSFSTPWAHGAGHVNPQKALSPGLIYDVSTSDYVAFLCSLDYNPQHLQLIVKHPNISCSRKFSDPGQLNYPSFSVVFGSKRVVRYTRTLTNVGETGSTYDVAVTGPLSLVRVSVKPRKLVFGKVGENQRYTVTFVSKKGADNSSVRSEFGSIVWSNAQHQVTSPIAFAWTELDL 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1961 765 Gene3D - 341 479 - -
Glsi02g1961 765 Gene3D Peptidase S8/S53 domain 133 624 IPR036852 GO:0004252|GO:0006508
Glsi02g1961 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 757 IPR045051 -
Glsi02g1961 765 Pfam PA domain 384 458 IPR003137 -
Glsi02g1961 765 FunFam Subtilisin-like protease SBT1.5 628 761 - -
Glsi02g1961 765 FunFam Subtilisin-like protease SBT1.9 17 102 - -
Glsi02g1961 765 FunFam Subtilisin-like protease SBT1.5 133 354 - -
Glsi02g1961 765 ProSiteProfiles Serine proteases, subtilase domain profile. 115 611 - -
Glsi02g1961 765 CDD Peptidases_S8_3 99 577 IPR034197 -
Glsi02g1961 765 Pfam Subtilase family 132 581 IPR000209 GO:0006508|GO:0008236
Glsi02g1961 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 102 IPR037045 -
Glsi02g1961 765 CDD PA_subtilisin_like 347 472 - -
Glsi02g1961 765 MobiDBLite consensus disorder prediction 201 222 - -
Glsi02g1961 765 FunFam subtilisin-like protease SBT1.5 341 479 - -
Glsi02g1961 765 SUPERFAMILY Subtilisin-like 101 615 IPR036852 GO:0004252|GO:0006508
Glsi02g1961 765 Pfam Peptidase inhibitor I9 24 102 IPR010259 -
Glsi02g1961 765 Pfam Fibronectin type-III domain 658 757 IPR041469 -
Glsi02g1961 765 SUPERFAMILY Protease propeptides/inhibitors 23 101 - -
Glsi02g1961 765 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Glsi02g1961 765 PRINTS Subtilisin serine protease family (S8) signature 131 150 IPR015500 -
Glsi02g1961 765 PRINTS Subtilisin serine protease family (S8) signature 540 556 IPR015500 -
Glsi02g1961 765 Gene3D - 628 760 - -
Glsi02g1961 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 541 551 IPR023828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1961 Glsi-ChrGlsi02 69073857 69076503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1961 11 763 Subtilisin-like Serine Gene Family AT2G05920 70.424 0.0 1097