Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1943 ATGGATGACTTTTCTCCTGAGAAATTTCTGGGCGAGATTTTCTGGGACGAACATCTTCCTCCTGCAAATCAGTTTGCTTCTTCTCAGAATACAGAAATACCCAGAATTGGATTTGGGCAAGAAAATCTTCCTTTTGAATCAAATTCCCAGAACACCCAGGATGTAGATGAACCTCTCCCTCCGGCAAATCAAGGTGAATTTCTTCAGCATAGCTACCTACCCAGAGTTGAATTTGGGCAAGAAAGTTCTCATAATGGGTCTCTCCCTCCAGCGAATCAAGGTGCTTTTAGTCAAAACAGTGATCTACCCATAATTGGATTTGAGCAAGAAAGTTCTTATAATGGGTCCACTTCTTGTTCCAGTACCACAATGGATGGTCCTTTTCCTCCTGCAGATCGCAGTGCTTTCGTTCAATACAGAGACCTACCCAGAATTGGATTTGGTCAAGAAAGTCCTAATAGTGGGTCAAATTCCAGAAACACGAGCAGGAGAATGATTGACTTCTGGAGAAAAAGTTGGCCTGTTCAGAGAACGAACGTAGCAGAGTATGAAAGAGAACGTGGCTTCAGGCATATGATCAACGAGAGGATGAGGAGGCAGAGGCAGAGGCAGTGCTGCTTAGCTCTGCACTCCATTTTACCAAATGGAACCAAAAATGATATTAATTCGGTGATTCAAATGGCAGCCAAGGAGATTCAAAGGCTTCAAGCTTGCAGGGATGAATTGCAGAGGCAAAAATTTGAGCTTGAAGCTAATCTTCAAGCTGAAGAGAGCAGCAAAGTTCAATTCAAGGTGGCTAATCCCAGATCTTCCATTGATTCTATGCTTGAGATTCTTCAATTCTTGAAGGGCCTTGGAGTGAATACCAAAAGCATCACATCAAATTTCTCTCCTGACGAATTGTTTGCAATATTGCAGATAGAAACCTAG 930 0.4258 MDDFSPEKFLGEIFWDEHLPPANQFASSQNTEIPRIGFGQENLPFESNSQNTQDVDEPLPPANQGEFLQHSYLPRVEFGQESSHNGSLPPANQGAFSQNSDLPIIGFEQESSYNGSTSCSSTTMDGPFPPADRSAFVQYRDLPRIGFGQESPNSGSNSRNTSRRMIDFWRKSWPVQRTNVAEYERERGFRHMINERMRRQRQRQCCLALHSILPNGTKNDINSVIQMAAKEIQRLQACRDELQRQKFELEANLQAEESSKVQFKVANPRSSIDSMLEILQFLKGLGVNTKSITSNFSPDELFAILQIET 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1943 309 MobiDBLite consensus disorder prediction 111 127 - -
Glsi02g1943 309 CDD bHLH_AtbHLH_like 184 243 IPR045239 -
Glsi02g1943 309 MobiDBLite consensus disorder prediction 34 58 - -
Glsi02g1943 309 Gene3D - 185 264 IPR036638 GO:0046983
Glsi02g1943 309 Coils Coil 225 259 - -
Glsi02g1943 309 PANTHER TRANSCRIPTION FACTOR BHLH041-RELATED-RELATED 82 309 IPR044658 -
Glsi02g1943 309 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 186 235 IPR011598 GO:0046983
Glsi02g1943 309 MobiDBLite consensus disorder prediction 78 99 - -
Glsi02g1943 309 MobiDBLite consensus disorder prediction 34 65 - -
Glsi02g1943 309 Pfam Helix-loop-helix DNA-binding domain 190 236 IPR011598 GO:0046983
Glsi02g1943 309 MobiDBLite consensus disorder prediction 111 133 - -
Glsi02g1943 309 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 184 251 IPR036638 GO:0046983
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1943 133 309 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G43650 40.110 1.23e-37 131