Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1929 ATGCCTGGGAATAAGTATAACGGTAATTCTCATCATTTGCCGGGTCGTGTTGAGCGACTACTAAGAGAAAGAGAGCTAAGAAAAAGCAGCCGGGCTTCTTATTTGAATGAGTCCACTGATAATAATGATAGGATTACTGTACCTTTTGAGCATGACCAACGCTTAAGAGACGATAATGACGGGAATTCTCATCATTTTCCGGGTCGTGTTGAGCGACTACTAAGAGAAAGAGAGCTAAGAAAAAGCAGCCGGGCTTCTTATTTGAATGAGTCCACTGATAATAATGATAGGATTACTGTACCTTTTGAGCATGACCAACGCTTAAGAGACGATAATTACTCGGGTGCTTCCTATATTGAACGATTCCTGGAAGAGGCTGCAGTGGCAAGAGCGCATAGTGAGGGATGCGAAAGGCAAGATGGGAGGCCTTTTAGACAAAGACTTTTGGTGGTGGCAAACAGGCTGCCAGTCTCAGCAGTCAGGAGAGGTAAAGACTCATGGTCTCTGGAGATAAGCGCCGGTGGTCTTGTGAGCGCTCTTTTAGGTGTGAAGGAGTTTGAGGCAAGGTGGATAGGTTGGGCTGGTGTCAATGTGCCAGATGAGATTGGACAGAAGGCACTTACCAAAGCTTTGGCTGAAAAGCTTGGACTTCCACAAGAAGATCGCCTTGCCACTACAAGGAGTTTCCAGTCTCAGTTTGCAGCATATAAGAAGGCAAATCAAATGTTTGCTGATGTTGTGAACAAGCACTATGAAGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATGCTTAAAGGAATATAACAGGAAAATGAAAGTTGGCTGGTTTCTTCACACACCATTTCCATCTTCAGAAATTCATAGGACACTGCCCTCACGTTCAGAGCTCCTGCATTCTGTTCTTGCAGCTGATTTAGTTGGTTTGATGGGTTGGTTGGGTTTTGAATCAGTGAATGCCATGGCGGATAACCTGGAGAAATACTTGATAATTCCTAAACAAAATTTTCACACCTATGATTATGCACGACATTTTGTCAGTGCTTGTACTTGCATCCTTGGACTTGAGGGTACGCCTGAAGGGGTTGAGGATCAAGGGAGGGTGACTCGAGTTTCTGCATTTCCTATTGGGATAGACTCGGATCGATTCATATGTGCACTTGAGCTTCCTCAAGTTCAGGACCACATGAAAGAATTACAAGAAAGATTTAAAGGCAGGAAGGTAATGTTAGGTATTGATCGGCTTGATATGATTAAAGGAATTCCTCAGAAAATTCTAGCTTTTGAAAAATTTCTGGAAGAGAATGCTTATTGGCGTGATAAAGTAGTTTTGCTTCAAATTGCTGTGCCAACAAGAACAGATGTTCCTGAGTGTATGATATTTACATTACTTTGTCTTGTTCTTCAAAGTAGAATACTATACTGGCTGAGGAGTTTGCTTGTGTTTTTAAATTCATGTCTAAAGCTTGTTCTCCGGATGAACATAATCACTCCCTTGAGAATTGAGTCTACAATCAATATAATCCGTTCAAACTTCAAAGTACTACTATTGTACAATGTTATTCACTCTGAACCTTGTGAACTGCCATTTTTGTTGTGGGGCTTGAGTTTTACTGGGCTATCTTACTTCTTGAGCTACCTGTCATCTTGGGTCCATGAAATTGTTGGTCGCATTAATGGCAGATTTGGATCATTGACTGCTGTTCCCATACATCATCACCTGGATCACTCTCTTGACTTTCATGCGCTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTCACATCTTTAAGGGATGGGATGAATCTTGTCAGTTACGAATATGTGGCCTGCCAGGAGAGAAAGAAAGGGGTTCTCATTCTTAGTGAATTTGATGGTGCTGCACAGTCTTTAGGTGCTGGAGCAATTTTGGTTAATCCCTCGAACATCACAGAAGTTGCTGCTGGAATTGCCCAGGCTCTGAATATGCCATCTGGGGAAAGAGAGAAGCGACATACACATAACTTTTTACATGTCAAATCCCACACTGTTCAGGAATGGGCAGAAACTTTCGTAAGCGAACTAAATGATACTGTTGTGGAGGCACAACTAAGGACAAGACAAGTGCCACCCCCACTTCCAACGAAGACTGCGATTGAACGTTATCTGCAGTCAACTAATTGA 2184 0.4245 MPGNKYNGNSHHLPGRVERLLRERELRKSSRASYLNESTDNNDRITVPFEHDQRLRDDNDGNSHHFPGRVERLLRERELRKSSRASYLNESTDNNDRITVPFEHDQRLRDDNYSGASYIERFLEEAAVARAHSEGCERQDGRPFRQRLLVVANRLPVSAVRRGKDSWSLEISAGGLVSALLGVKEFEARWIGWAGVNVPDEIGQKALTKALAEKLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNKHYEEGDVVWCHDYHLMFLPKCLKEYNRKMKVGWFLHTPFPSSEIHRTLPSRSELLHSVLAADLVGLMGWLGFESVNAMADNLEKYLIIPKQNFHTYDYARHFVSACTCILGLEGTPEGVEDQGRVTRVSAFPIGIDSDRFICALELPQVQDHMKELQERFKGRKVMLGIDRLDMIKGIPQKILAFEKFLEENAYWRDKVVLLQIAVPTRTDVPECMIFTLLCLVLQSRILYWLRSLLVFLNSCLKLVLRMNIITPLRIESTINIIRSNFKVLLLYNVIHSEPCELPFLLWGLSFTGLSYFLSYLSSWVHEIVGRINGRFGSLTAVPIHHHLDHSLDFHALCALYAVTDVALVTSLRDGMNLVSYEYVACQERKKGVLILSEFDGAAQSLGAGAILVNPSNITEVAAGIAQALNMPSGEREKRHTHNFLHVKSHTVQEWAETFVSELNDTVVEAQLRTRQVPPPLPTKTAIERYLQSTN 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1929 727 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 549 699 - -
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 682 693 - -
Glsi02g1929 727 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 222 725 IPR001830 GO:0003824|GO:0005992
Glsi02g1929 727 MobiDBLite consensus disorder prediction 44 67 - -
Glsi02g1929 727 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 146 463 - -
Glsi02g1929 727 CDD GT20_TPS 147 696 IPR001830 GO:0003824|GO:0005992
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 392 479 - -
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 553 681 - -
Glsi02g1929 727 Pfam Glycosyltransferase family 20 553 696 IPR001830 GO:0003824|GO:0005992
Glsi02g1929 727 Pfam Glycosyltransferase family 20 342 463 IPR001830 GO:0003824|GO:0005992
Glsi02g1929 727 Pfam Glycosyltransferase family 20 225 315 IPR001830 GO:0003824|GO:0005992
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 137 219 - -
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 339 391 - -
Glsi02g1929 727 Gene3D Glycogen Phosphorylase B; 220 317 - -
Glsi02g1929 727 MobiDBLite consensus disorder prediction 29 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1929 Glsi-ChrGlsi02 68497347 68506205 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1929 553 727 Trehalose Biosynthesis Gene Families AT1G78580 82.857 4.74e-86 289