Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1916 ATGATAAGGTTCATAACCCTGTTGTTGAGAATGCTGTTCAGCCAGAAAAGGCAACATTCTTTGCCATCTTCAACTAACAGCAAAATGAGTTCGCATTCACCAAGGACACAGAGATCAGTTCAATCAGGTGGCAGCAAAGGGGGGCACAGAGGTGACAAGACTGTCTCATCTTCTAGAGATGGGAATGGTATGATGCATAAAGCAAATGAAGAGGATTCAATTGTTATCATTTGTTTTTGGGGTGATTGCAGGTTAAAGTCAAGAGAAGAGGGGATGATACAAAATATGTGGCTAAGGTTTAGAATACGTCTATTCCTGATTTGGAAGCTGTCATTGATTTTTCTTGTGAATTTTGCTTGCTTTCTTGCTTATGTCCTTATTCAATACCTAGATATGAAACTATTCGCATGGATCGTCTTGAACCTGACTGCAGTTGCAACGGGTTCTCACATTGATGCTATACCATATTCTGGAAAATACGATGGATTTGTTGGTGTTTTAGGTGCTATAGAAGCCATCAATGTCCTGAAAAGGTCTGGGTTCAAACCTAGAAGCTGCTTGTTAGCTGGGAGCGAGAAACTTGTAGAAGCTCTAAAGACAAAAACTGATAGTCAAAACATCTCCTTTCTAGATGCTGCAAGATCTGCTGGATATGCAAAAGATGAAGATGACTTATCCAGTGTATTTTTGAAGAAAGGAACATATTCTACTTTTGTAGAATTGCACATAGAACAAGGTCCTATTCTGCAAGAAGAAGTTACAATTTCTCTTAACATTATGTGGAGCAGAAATTATGCTGGACTGGCAGCTGCTGAGTTAGCCCTTGCTGTTGGGAAACACGTATTGGAATCTGGGTCTATTGATACCGTCGGCACAGTTGGTATCCTGGAACTGCATCCCAGAGCAATCAACAGCATCCCTAGCAAATCACACTTGGAAATAGACATAAGAGACATTGATGAAGATCGAAGAAACCTTGTGATTGAGAAAATCCACCAATCAGCGATTAGAATAGCCAAAACTCAAGGTGTAAAGCTTTCAGAGTTTCATGTTGTCAATCAGGATCCACTAGCCCTTTCTGCTGAAGTAGTCATCAAGGCAATGAAAACTGCAACAAGAGAGTTAAACTTGACAAGCAAGTTGATGATTAGTAGAGCCTACCATGAGTCCCTGTTTATGGCCAGGTTATCTTCAATGGGCATGATTTTCATCCCATGTTATAAAGGATACAGCCATAAACCTGAAGAGTTTGCCAACATTCAAGATATATCAAATGGCGTAAAGCTAATCATGATAAACTCCTACCAGTTTTTTGTATCAGTGCTGTTGATTAGCTTGAACTTGAGTTTTCCATATACACTGCATCAATTTTGGAAGAAGGAGCATGACTGGGGATGGAAAAAGTTCATGGAGCTTTCAAACATTTATGATGGATTTGTTGACACTTCTGACAATCTGATAATAAAAGCTCAAGTTCAAGTCATCAGCTTGGAACTTTTGGTTCAGATGTGTAGTCATATTTGTTTGTTTCTGATCCATAGGGAGAAAGCAGACAGGCCTTTTCCTTGCCTTGATTGTCAGTATAGGAGAGAACTTGTTAGGGTATATTTGACAAATGTAGAACAAATTTGCCGGCATTTTGTGGAAGAGAGAAGAAGCAAGCTTGGGAAGTTGATAGAGGATAAAACGAGGTGGTCAAGCCAAGCCAAGCTGGTAGGGTTTTGGCTATGGAGAAGAAACTTAGGCTGCAGTCCCTTCATAAAGGTCATGTCCCTCCATCTGGGCCTTCTGGTTGCACATTCATCCCGAAATCCAGCAGGACCCGCTGCCCGCCCCGGTAAGGAAATGAATGTCGCCTGCAACGGTTTGCATTTGTGCCATGGCCGTGCTGCTTAA 1896 0.4114 MIRFITLLLRMLFSQKRQHSLPSSTNSKMSSHSPRTQRSVQSGGSKGGHRGDKTVSSSRDGNGMMHKANEEDSIVIICFWGDCRLKSREEGMIQNMWLRFRIRLFLIWKLSLIFLVNFACFLAYVLIQYLDMKLFAWIVLNLTAVATGSHIDAIPYSGKYDGFVGVLGAIEAINVLKRSGFKPRSCLLAGSEKLVEALKTKTDSQNISFLDAARSAGYAKDEDDLSSVFLKKGTYSTFVELHIEQGPILQEEVTISLNIMWSRNYAGLAAAELALAVGKHVLESGSIDTVGTVGILELHPRAINSIPSKSHLEIDIRDIDEDRRNLVIEKIHQSAIRIAKTQGVKLSEFHVVNQDPLALSAEVVIKAMKTATRELNLTSKLMISRAYHESLFMARLSSMGMIFIPCYKGYSHKPEEFANIQDISNGVKLIMINSYQFFVSVLLISLNLSFPYTLHQFWKKEHDWGWKKFMELSNIYDGFVDTSDNLIIKAQVQVISLELLVQMCSHICLFLIHREKADRPFPCLDCQYRRELVRVYLTNVEQICRHFVEERRSKLGKLIEDKTRWSSQAKLVGFWLWRRNLGCSPFIKVMSLHLGLLVAHSSRNPAGPAARPGKEMNVACNGLHLCHGRAA 631
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1916 631 MobiDBLite consensus disorder prediction 19 44 - -
Glsi02g1916 631 Gene3D Zn peptidases 187 256 - -
Glsi02g1916 631 Gene3D Zn peptidases 357 431 - -
Glsi02g1916 631 SUPERFAMILY Zn-dependent exopeptidases 144 430 - -
Glsi02g1916 631 Gene3D - 260 356 - -
Glsi02g1916 631 Gene3D Zn peptidases 134 186 - -
Glsi02g1916 631 Pfam MATH domain 451 494 IPR002083 GO:0005515
Glsi02g1916 631 MobiDBLite consensus disorder prediction 19 65 - -
Glsi02g1916 631 Pfam Peptidase family M20/M25/M40 147 430 IPR002933 GO:0016787
Glsi02g1916 631 CDD MATH 447 493 IPR002083 GO:0005515
Glsi02g1916 631 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 435 497 IPR008974 GO:0005515
Glsi02g1916 631 SUPERFAMILY TRAF domain-like 449 496 - -
Glsi02g1916 631 SUPERFAMILY Bacterial exopeptidase dimerisation domain 262 356 IPR036264 -
Glsi02g1916 631 PANTHER ALLANTOATE DEIMINASE-RELATED 185 252 IPR010158 GO:0016813
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1916 Glsi-ChrGlsi02 67792648 67813719 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1916 17 68 IQD Protein Family AT1G74690 48.077 2.58e-06 48.5