Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1904 ATGAATTCTTCAGAGACTTCCAGTGAAGAAACTGATCAACAAGAAGAAGAAGAAGTGCAAGATGACTCTGGAGGGACAAAACGCTCTTATGAGTGCACATTTTGCAGAAGGGGCTTCACCAACGCGCAGGCATTAGGGGGTCATATGAATATCCACAGAAAAGACAGAGCCAAGGCTAAGCAATTACAAGTAGGCACAGCCAATTCTTCTTCTTCACAGTTTCCAATATTAAACAAATTCCCATCCAATGAGGAATCCCTATTAGCCTCCTCTCCTCCTTTTCTCTCAAACCATCCCACAAGTTATTACTCCATTTTCGAGGGCCAGAGAAACTATAGCATGTATTTTCAGCCACCTCCACCGCCAAACCCTAGACACCCACCTCCATATGCCTTTCCATATGAGTATCTTAACCCAAGGTCTCAGTCTTTGGATATGAACCAAGAGCTTCTGGGGGCAAATTTGAGTCTCCAAATTGGTCCAAGCCATGAGGAAAATAATGAAGTCAGGAGAAGAATTCAGAATGATGAAGTGGACTTAGAGCTCAGGCTTGGCCATGATCCCTACTGA 570 0.4404 MNSSETSSEETDQQEEEEVQDDSGGTKRSYECTFCRRGFTNAQALGGHMNIHRKDRAKAKQLQVGTANSSSSQFPILNKFPSNEESLLASSPPFLSNHPTSYYSIFEGQRNYSMYFQPPPPPNPRHPPPYAFPYEYLNPRSQSLDMNQELLGANLSLQIGPSHEENNEVRRRIQNDEVDLELRLGHDPY 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1904 189 ProSitePatterns Zinc finger C2H2 type domain signature. 32 52 IPR013087 -
Glsi02g1904 189 Gene3D Classic Zinc Finger 3 79 - -
Glsi02g1904 189 ProSiteProfiles Zinc finger C2H2 type domain profile. 30 57 IPR013087 -
Glsi02g1904 189 SUPERFAMILY beta-beta-alpha zinc fingers 27 56 IPR036236 -
Glsi02g1904 189 PANTHER OS07G0101800 PROTEIN 8 187 - -
Glsi02g1904 189 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1904 Glsi-ChrGlsi02 67540182 67540751 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1904 21 61 C2H2 Transcription Factor Family AT3G09290 73.171 9.09e-17 72.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi02g1904 None None None