Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1903 ATGTTAAAAACGGTAGCATCAGGACTGTTGATTTCCTCTCTCCTCATATGTGTATCTGCAACTGATAATGAATTCCCCAGATGTAACTGTGATGACGAGGCGAGCCTGTGGACTATTGAGAGCATTATGGAGTGCCAGAGAGTCAGTGATTTCCTGATTGCTGTGGCCTATTTCTCCATTCCGGTTGAGCTGCTTTATTTTATCAGTTGCTCAAACTTCCCATTCAAATGGGTTCTTATTCAGTTCATTGCCTTCATTGTACTATGTGGATTGACACATATGCTGAATGGCTGGACTTATGGCCCTCACTCTTTTCAACTCATGGTGGCACTTACCGTCTTCAAAATTCTCACTGCCTTGGTATCATGTGCCACTTCTATCACACTTATCACTCTCATTCCTTTGCTTCTCAAAGTAAAGGTCAGAGAATTCATGCTGAAGAAAAAGACTTGGGATCTTGGACGAGAGGTTGGTATGATAATGAAACAAAAGGAAGCTGCAAGGCATGTAAGAATGCTCACTCAAGAGATTCGTAAGTCACTTGATAGGCATACAATTCTGGACACCACCCTAGTCGAGCTGTCTAAAACCCTGGGTTTGCAAAATTGTGCAATTTGGATGCCTAATGTTGATAAAACCGAGATGAACCTGACTCATGAATCAAATAGGAGGGATTTTAATTTCTCTGTGCCCATTAATGATCCAGATGTTGTAGAAATCAAGGGAAGTGATGACGTAAGTATTCTAAGCCCTGACTCAGCACTTGCTGCTGCCAGTAGTGGAAATTCTGGTGAGGCAGGACCAATAGCTGCAATTCGAATGCCAATGCTTCGGGTTGCAAATTTCAAAGGGGGGACACCTGAGCTAACACAGGCATGTTATGCTATACTGGTTTTGATTCTTCCTAGTGGAGAGCCTAGATCTTGGAGCATTCAGGAGCTGGAGATAATTAAGGTCGTAGCTGATCAGGTAGCTGTGGCTCTCTCTCATGCTGCAATTCTTGAAGAGTCCCAACGCATGAGAGAGCAGTTAGAGGAGCAAAATCGAGCTTTGCAACAGGCAAGAAGGAATGCTATGATGGCAAGTCAGGCAAGAAACTCTTTTCAGAAGGTCATGAGTAATGGAATGAGGAGGCCAATGCACTCAATCTTGGGTTTGCTGTCAATGATAGGAGATGAAAATTTAAAGAGTGAACAGAAACTTATTGTGGATGCAATGCTGAGGACCAGCAATGTTCTTTCAAACTTGATAAATGATGCTATGGACATTTCAGCAAAGGATGATGGAAGATTTCCGTTGGAGATGAGATCTTTTGGTTTACATGCCATGATAAAAGAAGCAGCTTGCCTTGCCAAGTGCATGTGTGTTTATAAGGGCTTTGGTTTTATGTTTGAGGTTGAAAAGTCTTTGCCTGACAATGTTATGGGTGATGAGAGGAGGGTCTTTCAGGTGATTTTGCATATGGTTGGGAACCTACTGGATGGTAACAAAGGGGGAGGGGTTCTTGTACTTCGGGTGTTTGCAGAACGTGGAAGTCAGGGAAGGAATGAACAGGGGTGGGCAACCTGGAGACCAAGCTCCTCTAGTGGGGATGTATATATTAGATTTGAGATAGCGATCAAAATAAGTAATTCTGAATTGGAGAGCTCAGTTTCTTTAGGACAGCTTGGTGGTAAGAAGTATACCAGTGATAGAGTTGAGGGCAGATTGAGCTTCAGCGTATGCAGGAGGATAGTTCAGTTGATGCAAGGGAACATATGGTTAGTACCGAATACTCAAGGTTTTCCTCAAACCATGGCCCTTCTTCTTCGGTTTCAATTAAGACCTTCCATATCTATAGCCATCTCTGAACCTGGAGAATCTTCAGAGCGTACAGATTCTAATTCTCTCTTCAGAGGTCTCCATGTCTTGTTGGCTGACAACGATGATGTAAATAGAGCTGTGACCCAGAAATTGCTTCAGAAGCTAGGTTGCGTTGTAACTTCTGTTTCTTCAGGATTCGAATGCCTTTCTGTGATTGGACCTTCTGGATCTTCTATCCAAGTCATTCTTTTGGATCTTCATATGCCCGAGTTAGACGGCTTTGAAGTTGCCGTTAGGATTCGGAAGTTTAAAAGCCGAAACTGGCCTGTGATAGTTGCCTTGACTGCAAGCGCAGATGAAGACTTGTGGGAAAGATGTGTGCAAACTGGTATCAACGGACTCATCCGAAAACCGGTTTTGTTGCAAGGAATCGCCAGTGAACTTCGAAGAATCCTGATGCAGGGAAATTAA 2274 0.4327 MLKTVASGLLISSLLICVSATDNEFPRCNCDDEASLWTIESIMECQRVSDFLIAVAYFSIPVELLYFISCSNFPFKWVLIQFIAFIVLCGLTHMLNGWTYGPHSFQLMVALTVFKILTALVSCATSITLITLIPLLLKVKVREFMLKKKTWDLGREVGMIMKQKEAARHVRMLTQEIRKSLDRHTILDTTLVELSKTLGLQNCAIWMPNVDKTEMNLTHESNRRDFNFSVPINDPDVVEIKGSDDVSILSPDSALAAASSGNSGEAGPIAAIRMPMLRVANFKGGTPELTQACYAILVLILPSGEPRSWSIQELEIIKVVADQVAVALSHAAILEESQRMREQLEEQNRALQQARRNAMMASQARNSFQKVMSNGMRRPMHSILGLLSMIGDENLKSEQKLIVDAMLRTSNVLSNLINDAMDISAKDDGRFPLEMRSFGLHAMIKEAACLAKCMCVYKGFGFMFEVEKSLPDNVMGDERRVFQVILHMVGNLLDGNKGGGVLVLRVFAERGSQGRNEQGWATWRPSSSSGDVYIRFEIAIKISNSELESSVSLGQLGGKKYTSDRVEGRLSFSVCRRIVQLMQGNIWLVPNTQGFPQTMALLLRFQLRPSISIAISEPGESSERTDSNSLFRGLHVLLADNDDVNRAVTQKLLQKLGCVVTSVSSGFECLSVIGPSGSSIQVILLDLHMPELDGFEVAVRIRKFKSRNWPVIVALTASADEDLWERCVQTGINGLIRKPVLLQGIASELRRILMQGN 757
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1903 757 ProSiteProfiles Histidine kinase domain profile. 371 605 IPR005467 -
Glsi02g1903 757 FunFam Ethylene receptor 632 756 - -
Glsi02g1903 757 Gene3D - 330 427 - -
Glsi02g1903 757 Coils Coil 330 364 - -
Glsi02g1903 757 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 349 430 IPR036097 GO:0000155|GO:0007165
Glsi02g1903 757 SUPERFAMILY CheY-like 631 753 IPR011006 -
Glsi02g1903 757 Gene3D - 428 607 IPR036890 -
Glsi02g1903 757 Pfam His Kinase A (phospho-acceptor) domain 366 428 IPR003661 GO:0000155|GO:0007165
Glsi02g1903 757 PIRSF Ethylen_sen_hybr_HK 1 757 IPR014525 GO:0004672|GO:0005789|GO:0009723|GO:0038199|GO:0051740
Glsi02g1903 757 FunFam Ethylene receptor 4 331 425 - -
Glsi02g1903 757 Gene3D - 160 329 IPR029016 -
Glsi02g1903 757 Gene3D - 616 753 - -
Glsi02g1903 757 SMART REC_2 634 753 IPR001789 GO:0000160
Glsi02g1903 757 CDD HisKA 362 424 IPR003661 GO:0000155|GO:0007165
Glsi02g1903 757 SMART gaf_1 182 338 IPR003018 GO:0005515
Glsi02g1903 757 Pfam GAF domain 182 328 IPR003018 GO:0005515
Glsi02g1903 757 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 476 589 IPR003594 -
Glsi02g1903 757 SUPERFAMILY GAF domain-like 185 331 - -
Glsi02g1903 757 CDD HATPase_ETR2_ERS2-EIN4-like 470 603 - -
Glsi02g1903 757 CDD REC_ETR-like 634 749 - -
Glsi02g1903 757 ProSiteProfiles Response regulatory domain profile. 635 753 IPR001789 GO:0000160
Glsi02g1903 757 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 418 591 IPR036890 -
Glsi02g1903 757 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 24 755 - -
Glsi02g1903 757 Pfam Response regulator receiver domain 636 743 IPR001789 GO:0000160
Glsi02g1903 757 SMART HisKA_10 364 429 IPR003661 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1903 Glsi-ChrGlsi02 67509510 67512500 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1903 22 753 Miscellaneous Gene Families AT3G04580 57.527 0.0 840
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi02g1903 Response_reg 3.6e-18 CL0304