Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1902 ATGGTTTCCTTGCTTTACTCTCAATAATCGATCTCTGAAGAAGCAGCAAGTCTGGCTAATCCTTGGTGGACCGGGCAGGTGGGGTTGCCGGGGGTAGACCCGGCAGCGAATTCCCCTGCCCTAAACAAACGCCACGGCCACACAGATATTTCCATCAACGAAAGCAGCGGAAGGAGTGTCGGCAACAGAGATGACGAGGACGAAAGAGAAAACGGGGACGAACCCAAAGAAGGAGCAGTTGATGTTGGAACTCGCAGACCAAGAGGGCGACCTCCCGGATCCAAAAACAAGCCCAAACCACCCATCTTCGTAACAAGAGACAGCCCAAACGCCCTTAGAAGCCACGTGATGGAGGTTGCCGGAGGAGCTGATGTGGCAGAAAGCGTAGCCCAATTCGCAAGAAGGCGTCAACGTGGGGTTTGTGTCCTCAGTGGGAGTGGCTCTGTCGCCAACGTTACTCTCAGACAACCAGCTGCTCCTGGTGCCGTTGTAGCACTCCATGGAAGGTTCGAGATTTTATCGCTAACCGGGGCGTTTCTCCCGGGACCCGCCCCACCCGGCTCCACTGGCCTCACGGTGTACCTCGCCGGAGGACAGGGGCAGGTGGTGGGAGGGAGCGTGGTGGGGTCTCTAGTTGCAGCTGGACCAGTTATGGTTATTGCTGCCACTTTTGCTAATGCAACATATGAGAGACTGCCACTTGATGATGATGATGAGGGTGCCAGTGCAGCCCATGGAGGAGGTGCCGGGGGGTCTTCGCCGCCTCCACCAGGGATCGGAAGCAGTGGGGGTCAGTTGCAAGCAGGGCTTCCAGATCCATCATCTCTGCCTTTGTACAATCTACCACCAAATCTGCTTCCCAACGGCGGCGGGGGGCAGGTGGGGCATGACGCTTTTGCTTGGGCTCATGGACGCCCACCTTACTGA 927 0.5707 MVSLLYSQXSISEEAASLANPWWTGQVGLPGVDPAANSPALNKRHGHTDISINESSGRSVGNRDDEDERENGDEPKEGAVDVGTRRPRGRPPGSKNKPKPPIFVTRDSPNALRSHVMEVAGGADVAESVAQFARRRQRGVCVLSGSGSVANVTLRQPAAPGAVVALHGRFEILSLTGAFLPGPAPPGSTGLTVYLAGGQGQVVGGSVVGSLVAAGPVMVIAATFANATYERLPLDDDDEGASAAHGGGAGGSSPPPPGIGSSGGQLQAGLPDPSSLPLYNLPPNLLPNGGGGQVGHDAFAWAHGRPPY 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1902 308 CDD DUF296 113 196 IPR005175 -
Glsi02g1902 308 PIRSF ESCAROLA 31 308 IPR014476 GO:0003680
Glsi02g1902 308 MobiDBLite consensus disorder prediction 233 308 - -
Glsi02g1902 308 SUPERFAMILY AF0104/ALDC/Ptd012-like 109 237 - -
Glsi02g1902 308 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 55 304 IPR014476 GO:0003680
Glsi02g1902 308 ProSiteProfiles PPC domain profile profile. 109 247 IPR005175 -
Glsi02g1902 308 MobiDBLite consensus disorder prediction 23 110 - -
Glsi02g1902 308 FunFam AT-hook motif nuclear-localized protein 112 239 - -
Glsi02g1902 308 Pfam Plants and Prokaryotes Conserved (PCC) domain 113 225 IPR005175 -
Glsi02g1902 308 Gene3D - 112 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1902 Glsi-ChrGlsi02 67450626 67452355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1902 18 308 AT-hook Motif Nuclear Localized (AHL) Family AT4G14465 61.433 1.39e-106 310