Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1881 ATGGGAAAAAAACGATGTGCTCTTGGAGGTGTCTACAGAAAGTTCAAGCCACAAATGCTCATGATCTTAGTCCAGTTGGGCTATACCTTCTTGTATTTCATCTGTGAGGCTTCCTTCAACCATGGCATGAATCCTCATGTTTATGTAACGTACCGAAATATTGTCGCTAGTCTTGTATTGTTCCCTTTTGCATATTTTCTTGAGAGAAAATTAAGGCCAAAGCTGACACTAGCTCTTTTCTTGGAAATTTTTGTGCTTTCTCTCTTGGGGGTTAGTTTGCCTCTTAACATGTACTTTGCAAGCCTAAGATACACCTCTCCAGCCTTTGTGGCTTCAACTGGCAATACCATGGCTGCCATTACCTTTGTTATTGCAGTGGCACTCAGGTTCGAGGTTATTGATCTACATGATCTTCGAAGTATAGCAAAAGTTCTAGGGACGTTGGTCTCTTTAGTAGGTGTAATGATAGTGACACTATACAAAGGCCCTCTAATGAGAAATTTATGGCATCCTCTAATCCATATTCAAAAAAATAGTGGTTCTATCCATGAGAACTGGTTGAAGGGATCACTCCTTGCAGTTGCAAGCTGCATAACATGGTCCATATCCTACATTGTGCAGACAACAACTTTGAAAAGATATGTAGCTCCACTATCACTCACTACATGGATGAGCCTTGTTGGAGCAGCACAATCAGCTGTTATTGCAGTGATAGTAGAACATAACCCATCAGCCTGGGTGATAGGATTCAATATTGACTTGTGGTCCACCATATACGGTGGAGTTGTTGCCTCTGGTTTCATAACTTATATTCAACTATGGTGCACTGAAGAAAAAGGGCCAGTTTTTGTCACCATGTTTAACCCTCTTGGTACAATATTAGTGTCAATTCTAGCATACTTCGTCTTGGGTGAGAAACTTCATTTGGGCTGCATCATAGGCGCAATTATTGTCATAATTGGTCTGTACCTGCTGTTGTGGGGCAAAGGAGATGTTCAAGAATCTCAAGACAAGACAAAAGAGCAACTGCACTGCACTTTTGATGAACCAGAATGCAGATTATAG 1065 0.4103 MGKKRCALGGVYRKFKPQMLMILVQLGYTFLYFICEASFNHGMNPHVYVTYRNIVASLVLFPFAYFLERKLRPKLTLALFLEIFVLSLLGVSLPLNMYFASLRYTSPAFVASTGNTMAAITFVIAVALRFEVIDLHDLRSIAKVLGTLVSLVGVMIVTLYKGPLMRNLWHPLIHIQKNSGSIHENWLKGSLLAVASCITWSISYIVQTTTLKRYVAPLSLTTWMSLVGAAQSAVIAVIVEHNPSAWVIGFNIDLWSTIYGGVVASGFITYIQLWCTEEKGPVFVTMFNPLGTILVSILAYFVLGEKLHLGCIIGAIIVIIGLYLLLWGKGDVQESQDKTKEQLHCTFDEPECRL 354
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1881 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 161 - -
Glsi02g1881 354 SUPERFAMILY Multidrug resistance efflux transporter EmrE 250 330 - -
Glsi02g1881 354 Pfam EamA-like transporter family 188 326 IPR000620 GO:0016020
Glsi02g1881 354 Pfam EamA-like transporter family 21 158 IPR000620 GO:0016020
Glsi02g1881 354 PANTHER WAT1-RELATED PROTEIN 17 333 IPR030184 GO:0016020|GO:0022857
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi02g1881 Glsi-ChrGlsi02 67044299 67047296 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1881 16 336 Nodulin-like Gene Family AT5G07050 40.181 9.69e-88 268