Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1871 ATGGATGATCGCCATAGGGGGAAGCAGGAGAAGGAAGAGAAGGCAAGGGAAGAGGGGGTCCGGTACCGGGGCGTTCGGAGGCGGCCCTGGGGGAAGTATGCTGCGGAAATAAGGGACCCATCAAAGCAGGGGACAAGGCTGTGGTTGGGGACATTTGATACAGCGGAAGAAGCAGCTAGAGCATATGATCGAGCTGCCTTCAGCTTGAGGGGTCATCTTGCAATCCTTAATTTCCCCAATGAGTACTATGCTCAAATAAGGGGCTCGCCGCCATATCCTCCCTATTTAGCAGCATCTTCTTCTGCTTCTTTTCATGGTCATGGCAGTGGAGGCTCGTCTTCTTCTCGACAAAGGCAAGTTTTTGAGATTGAGTATTTGGATAATCAGGTGTTGGAAGACCTTCTTGAATCAGAAGAAGAGAAGAAGAAAAGGAAGGGAGATTGA 444 0.5 MDDRHRGKQEKEEKAREEGVRYRGVRRRPWGKYAAEIRDPSKQGTRLWLGTFDTAEEAARAYDRAAFSLRGHLAILNFPNEYYAQIRGSPPYPPYLAASSSASFHGHGSGGSSSSRQRQVFEIEYLDNQVLEDLLESEEEKKKRKGD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1871 147 MobiDBLite consensus disorder prediction 94 116 - -
Glsi02g1871 147 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Glsi02g1871 147 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 MobiDBLite consensus disorder prediction 102 116 - -
Glsi02g1871 147 MobiDBLite consensus disorder prediction 1 21 - -
Glsi02g1871 147 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Glsi02g1871 147 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Glsi02g1871 147 CDD AP2 29 80 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 PANTHER DNA-BINDING DOMAIN 10 141 IPR044808 GO:0003700|GO:0009873
Glsi02g1871 147 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Glsi02g1871 147 Coils Coil 128 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1871 Glsi-ChrGlsi02 66869081 66869524 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1871 21 142 AP2-EREBP Transcription Factor Family AT3G23230 69.672 1.01e-51 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g1871 AP2 7.4e-17 CL0081