Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1870 ATGGATGATCGCCATAGGGGGAAGCAGGAGAAGGAAGAGAAGGCAAGGGAAGAGGGGGTCCGGTACCGGGGCGTCCGGAGGCGTCCCTGGGGGAAGTATGCTGCGGAAATAAGGGACCCATCAAAGCAAGGAGCAAGGCTGTGGCTGGGGACGTTTGATACAGCGGAAGAAGCAGCTAGAGCATATGATCGAGCTGCCTTCAGCTTGAGGGGTCATCTTGCAATCCTTAATTTCCCCAATGAGTACTATGCTCAAATAAGGGGCTCACCGCCATATCCTCCCTATTTAGCAGCATCTTCTTCTGCTTCTTTTCATGGTCATGGCAGTGGAGGCTCGTCTTCTTCTCAACAAAGGCAAGTTTTTGAGATTGAGTATTTGGATAATCAAGTGTTGGAAGACCTTCTTGAATCAGAAGAAGAGAAGAAGAAAAGGAGGGGAGATTGA 444 0.4977 MDDRHRGKQEKEEKAREEGVRYRGVRRRPWGKYAAEIRDPSKQGARLWLGTFDTAEEAARAYDRAAFSLRGHLAILNFPNEYYAQIRGSPPYPPYLAASSSASFHGHGSGGSSSSQQRQVFEIEYLDNQVLEDLLESEEEKKKRRGD 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1870 147 MobiDBLite consensus disorder prediction 1 21 - -
Glsi02g1870 147 MobiDBLite consensus disorder prediction 94 118 - -
Glsi02g1870 147 PRINTS Ethylene responsive element binding protein signature 45 61 IPR001471 GO:0003700|GO:0006355
Glsi02g1870 147 PRINTS Ethylene responsive element binding protein signature 22 33 IPR001471 GO:0003700|GO:0006355
Glsi02g1870 147 Pfam AP2 domain 21 72 IPR001471 GO:0003700|GO:0006355
Glsi02g1870 147 FunFam Ethylene-responsive transcription factor 2 21 80 - -
Glsi02g1870 147 CDD AP2 29 80 IPR001471 GO:0003700|GO:0006355
Glsi02g1870 147 MobiDBLite consensus disorder prediction 102 118 - -
Glsi02g1870 147 PANTHER DNA-BINDING DOMAIN 10 140 IPR044808 GO:0003700|GO:0009873
Glsi02g1870 147 SMART rav1_2 21 85 IPR001471 GO:0003700|GO:0006355
Glsi02g1870 147 SUPERFAMILY DNA-binding domain 21 80 IPR016177 GO:0003677
Glsi02g1870 147 Gene3D AP2/ERF domain 20 81 IPR036955 GO:0003700|GO:0006355
Glsi02g1870 147 ProSiteProfiles AP2/ERF domain profile. 21 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1870 Glsi-ChrGlsi02 66866569 66867012 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1870 21 142 AP2-EREBP Transcription Factor Family AT3G23230 70.492 1.63e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g1870 AP2 9e-17 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1870 02 66866569 66867012 Glsi02g1870 02 66866569 66867012 ECH