Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1854 ATGTCTTCCTTGCACTTCTTAGTGCTCCTACTTGGGGTGGTGCTTCTCACCACCCCAGCCTTGGCTAATTACAACTACGAGCCACCCATCTACAAGCCTCCACCCATTGAGTACCCACCTCCACTTTATCCCCCACCTATTTACAAGCCTCCGCCAGTTCAGAAGCCGCCACCAGTTTATACGCCACCTACCCACAAGTCTCCACCCATTGAGAAGCCACCACCAGTTTATACGCCACCTATCCACAAGCCTCCACCCATTGAGAACCCGCCACCTTATTACAAGCCTCCGCCAGTTGAGAAGCCACCACCAGTTTATACGCCACCTATACACAAGCCTCCACCTATTGAGAAGCCACCACCAGTTTATACACCACCAATCCACAAGTCTCCACCCATTGAGAACCCACCACCTTATTACAAGCCTCCGCCAGTTGAGAAGCCACCACCAGTATATACACCGCCTATCCGCAAGCCTCCACCTATTGAGAAGCCACCACCAGTTTATACACCACCAATCCACAAGCCTCCACCAGTTTATACGCCACCTATCCACAAACCTCCACCAGTCTATCTACCACCTATCCACAAACCTCCGCCCATTGAGAAGCCTCCACCAGTTTATACGCCACCTATCCACAAGCCTCCGCCCATTGAGAAGCCTCCACCAGTTTATACGCCACCTATTTACAAGCCTCCACCCATTGAGAAGCCACCACCAATTTATACACCGCCTATCCACAAGCCTCCACCAGTTTATACACCGCCTATCCACAAGCCGCCACCAGTTTATACACCACCCATTTACAAGTCTCCGCCAGTTTATACACCACCTATCTACAAGCCTCCACCAGTTTATACGCCACCTATCCACAAGCCTCCACCAGTTTATACAACACCTATCCACAAGCCTCCGCCCATTGAGAAGCCTCCGTATACGCCACCTACTTACAAGCCTCCACCCATTAAGAAGCCGCCACCAGTTTATACACCACCAATTCACAAGCCTCCACCAGTTTATACACCGCCTATCCACAAGCCTCCGCCAGTTTATACACCACCAATCCACAAGCCTCCGCCAGTTTATACACCACCTATCCAGAAGCCTCCACCAGTTTATCTACCACCTATCCACAAGCCTCCGCCCATTGAGAAGCCTCCATCACTTTGTCCACCACCTATCTATAAGCCTCCACCCATTGAGAAGCCACCTATCTACAAACCACCAACCATTTACAAGCCGCCAGTTGAGAAGCCACCAGTCTACAACCCTCCTCCTGTTCTGAAGCCACCCCATATTTACCCACCACCTATCTACAATTCACCTCCAATTGTGACGCCACCAGTGTATAAGCCTCCATTTGAGAAGCCTCCTGTATACAAGCCTCCCTTTGAGAAACCACCGACTTACTGGCTGCCACCTTATGGCCATTATCCAAAGCATCCTCCGTCGGAGAGTGAGCCGTGA 1467 0.5112 MSSLHFLVLLLGVVLLTTPALANYNYEPPIYKPPPIEYPPPLYPPPIYKPPPVQKPPPVYTPPTHKSPPIEKPPPVYTPPIHKPPPIENPPPYYKPPPVEKPPPVYTPPIHKPPPIEKPPPVYTPPIHKSPPIENPPPYYKPPPVEKPPPVYTPPIRKPPPIEKPPPVYTPPIHKPPPVYTPPIHKPPPVYLPPIHKPPPIEKPPPVYTPPIHKPPPIEKPPPVYTPPIYKPPPIEKPPPIYTPPIHKPPPVYTPPIHKPPPVYTPPIYKSPPVYTPPIYKPPPVYTPPIHKPPPVYTTPIHKPPPIEKPPYTPPTYKPPPIKKPPPVYTPPIHKPPPVYTPPIHKPPPVYTPPIHKPPPVYTPPIQKPPPVYLPPIHKPPPIEKPPSLCPPPIYKPPPIEKPPIYKPPTIYKPPVEKPPVYNPPPVLKPPHIYPPPIYNSPPIVTPPVYKPPFEKPPVYKPPFEKPPTYWLPPYGHYPKHPPSESEP 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1854 488 MobiDBLite consensus disorder prediction 150 169 - -
Glsi02g1854 488 MobiDBLite consensus disorder prediction 54 141 - -
Glsi02g1854 488 PANTHER PROLINE-RICH EXTENSIN-LIKE PROTEIN EPR1 312 487 - -
Glsi02g1854 488 MobiDBLite consensus disorder prediction 202 224 - -
Glsi02g1854 488 PRINTS Proline rich extensin signature 29 50 - -
Glsi02g1854 488 PRINTS Proline rich extensin signature 52 68 - -
Glsi02g1854 488 PRINTS Proline rich extensin signature 71 88 - -
Glsi02g1854 488 PRINTS Proline rich extensin signature 92 117 - -
Glsi02g1854 488 MobiDBLite consensus disorder prediction 296 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1854 Glsi-ChrGlsi02 66144842 66146308 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1854 301 383 Trihelix Transcription Factor Family AT4G33970 44.186 4.21e-06 47.4