Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1853 ATGAAGCTCCGTCGCTCATCCATTGAAGGTCTTTGTTCTTGGAGCCATCAAAGTTACATCTCGGTTCAGCCATTGAAGCTCCGTCACCAACTATTGAAACTCAGAGGTGTGTACCACCGAGATATAAAGCCAGAGAACCTTTTGTTGGATGAAAATAGAAATCTTAAGGTGTCTGATTTTGGGTTAAGTGCTTTGGATGAATCCAAGAGGCAGGATGGCTTACTGCATACTACTTGTGGCACACCTGCCTATGTTGCTCCTAAAGTCATCAAAAGGAAAGGGTATGATGGTGCCAGAGCTGATGTTTGGTCTTGTGGAGTAGTCCTGTTTGTATTATTAGCAGGTTATCTCCCTTTTCATGATTCAAACTTGATAGAGATGTATAGGAAGACTGGCAAAGCAGAATTTAAATGCCCTGATTGGTTCTCACCAGAAGCACGCAGACTAGTATGCAAGATATTGGAACCAGATCCTGATACTAGGATTTCCATAGCTATGACTAAGGAATGTTCTTGGTTCAAGATAGGACTAAATGCTAAGCATAAAAAACCTAAAGTGGAAAAAAAGACTGTCTCGTTGTCAGGCAACAACCCTTCTGATCAAAGCAATGAAACTGATAGTGACAATATAGTTGCAGAAGCAAGGGAAGAGTCATTTGTGCCCACCAGTATAAATGCATTTGATATTATCTCCCTTTCGGCTGGTTTTAATCTTTCTGGATTCTTCAGTGACAGTTTTTAG 741 0.4089 MKLRRSSIEGLCSWSHQSYISVQPLKLRHQLLKLRGVYHRDIKPENLLLDENRNLKVSDFGLSALDESKRQDGLLHTTCGTPAYVAPKVIKRKGYDGARADVWSCGVVLFVLLAGYLPFHDSNLIEMYRKTGKAEFKCPDWFSPEARRLVCKILEPDPDTRISIAMTKECSWFKIGLNAKHKKPKVEKKTVSLSGNNPSDQSNETDSDNIVAEAREESFVPTSINAFDIISLSAGFNLSGFFSDSF 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1853 246 Pfam NAF domain 221 244 IPR004041 GO:0007165
Glsi02g1853 246 ProSiteProfiles Protein kinase domain profile. 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1853 246 Pfam Protein kinase domain 35 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1853 246 FunFam Maternal embryonic leucine zipper kinase 26 193 - -
Glsi02g1853 246 MobiDBLite consensus disorder prediction 190 207 - -
Glsi02g1853 246 SUPERFAMILY Protein kinase-like (PK-like) 34 193 IPR011009 -
Glsi02g1853 246 SMART serkin_6 1 173 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1853 246 MobiDBLite consensus disorder prediction 186 207 - -
Glsi02g1853 246 ProSitePatterns Serine/Threonine protein kinases active-site signature. 37 49 IPR008271 GO:0004672|GO:0006468
Glsi02g1853 246 ProSiteProfiles NAF domain profile. 219 243 IPR018451 GO:0007165
Glsi02g1853 246 Gene3D Transferase(Phosphotransferase) domain 1 14 223 - -
Glsi02g1853 246 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 32 242 - -
Glsi02g1853 246 Gene3D Kinase associated domain 1, KA1 224 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1853 Glsi-ChrGlsi02 66056397 66059754 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1853 35 244 CBL-interacting serine-threonine protein kinases AT5G58380 61.233 6.68e-97 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Glsi02g1853 Pkinase 2.9e-35 CL0016