Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1839 ATGGGTCGTGTAGGGTCAAGGAACACTAGCCCGTCAAGTCAAAAGGTCATTAAAACCAAACCACAGGGTTTAGATGAGGAAACACTTGCTACATTTGGTAAGGCTGTATATGTTGATATTCAAATGGAGGATAATATATGGGCAATGTTGCCTGAGGACTTGTTGTATGAGATCTTGGCTAGGGTCCCTCCATTTATGATTTTTTGGCTTCGTTCTGTCTGGTTTGAACCCAATCAGACCCAAATGGTTTTGTCTCTTCTTCAACGTAACACATCATCTTCTTCTGGAGAGAGAGGAGGCCGAAGAAAGCAAGCAGAACCCAGGAGGTTCCTTGGGGTGAGAAGACGCCCTTGGGGTAGATATGCTGCTGAAACTAGGGACCCTACTACTAAAGAAAGGCATTGGCTTGGCACTTTTGACACTGCTCAAGAACCAGGTAGATCCCCTGGGCCTGTGAAGGTGCCACCATCACTATGGGTTCAGTTTGGATTAGTTTTGATGTCTGGGTTCAGTTTTCGGGTTCAATTTTGGCAGCCTAACATGGTGCATCGAAATCTTCCTCTCGATTCTTTTGATGTCTGGGTTCAGTTTGGGTTTACTGTTAGAATAGGAAAATTGTTGAGACCTTAG 630 0.4476 MGRVGSRNTSPSSQKVIKTKPQGLDEETLATFGKAVYVDIQMEDNIWAMLPEDLLYEILARVPPFMIFWLRSVWFEPNQTQMVLSLLQRNTSSSSGERGGRRKQAEPRRFLGVRRRPWGRYAAETRDPTTKERHWLGTFDTAQEPGRSPGPVKVPPSLWVQFGLVLMSGFSFRVQFWQPNMVHRNLPLDSFDVWVQFGFTVRIGKLLRP 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1839 209 MobiDBLite consensus disorder prediction 1 21 - -
Glsi02g1839 209 PRINTS Ethylene responsive element binding protein signature 132 148 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 PRINTS Ethylene responsive element binding protein signature 110 121 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 92 144 - -
Glsi02g1839 209 CDD AP2 109 148 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 Gene3D AP2/ERF domain 108 148 IPR036955 GO:0003700|GO:0006355
Glsi02g1839 209 Pfam AP2 domain 112 142 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 SUPERFAMILY DNA-binding domain 110 144 IPR016177 GO:0003677
Glsi02g1839 209 ProSiteProfiles AP2/ERF domain profile. 109 148 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 SMART rav1_2 109 157 IPR001471 GO:0003700|GO:0006355
Glsi02g1839 209 MobiDBLite consensus disorder prediction 1 19 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1839 Glsi-ChrGlsi02 65319048 65320200 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1839 75 183 AP2-EREBP Transcription Factor Family AT5G18560 53.846 2.41e-29 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g1839 AP2 1.2e-05 CL0081