Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1833 ATGGGAAACCAAGAAGTGAAGGTTGTGAGCTTCTGGGCGAGTCCATTTGGGGCCAGGGTTGAGTGGGCTCTGAAGCTGAAGGGTGTTGATTATGAGTATATAGAAGAAGATATCTTCGACAAAAGCAGCCTTCTTCTGGAGCTGAACCCGGTTCACAAGAAGGTTCCGGTTCTGGTCCATCACCGGAAACCCCTCGCCGAGTCCTACATCATCCTTGAATACATCGACGAAACATGGAGTCGCTATCCCTTGCTGCCTTATCACCCTTACCAAAGAGCTCTCGCACGTTTTTGGCCTAAATTTGCCGATGAGAAGGTTTTGGAAGCTGCATGGAGCGCAATGTGCTCAACTGGGGATGAAAAGGAACGGGCATTGAAGGTAGCCAGAGAAGGAATGGAAAAGATAGAGGAACTGATTAAGGGGAAGAAATTCTTTGGAGGGGACGACATTGGATACTTGGACATTGCATTGGGATGGATCTCCTACTGGCTCCCTGTTTGGGAAGAAGTTGGGTCCATGCAAATTGTGGACCCTTCGAAATGTGCAGCCACAATTGCTTGGATGACCAAGTTCACCAATCACACTGTCATCAAGGACTGCTTGCCCCCAAGAGACGAGATGCTTGTCTATTACCACCGTCGCAAACAAGAATTGTCTTCTACCGGTCATGGCTGGTTCAAGCCCTCAGGGGATAAGGATTTGAGACGCCTTGAGTCTGGGTTTAAGTTAGTGGGGTTGTTTGTGCCAAGCGAAGTATGTGGTTGGTTCAGATTTGAGAAGTACACTAAGCTAAAGAAGAATGAGGTTCAGCAGCCTCTTACTTTCGATGATGTATTTTTTGTTCCAAAAGCGAAAACAGTTGATCATGTTCGTGTTAGTCAACTTAGTGCACTAATTTCGATCATGTTTCGAGTATCTAGTTTTGGAAGTGCTTTGGTTGCCCAGGTGCCTCTAGTTCCTTCTTCCTTGTTTTATCGGGGCATAAGCTTGATCACTATGCCTGGTCGGTCCATATTGTTCAATAGAGTAAGACGAGTTCATAAAGAACTTGTGGGGGCAATAGGGGCCCTGATCATCGGAGGCAATGCAAATTTCCCCATCTTGCCTCGAGGATTAGGGGTGGAGAGGACAAGTAGCCCATCACTTAAAGGGTGGGGGGCGCTTGAGACTCAAAACCAAGGGATAAGGTAA 1191 0.4719 MGNQEVKVVSFWASPFGARVEWALKLKGVDYEYIEEDIFDKSSLLLELNPVHKKVPVLVHHRKPLAESYIILEYIDETWSRYPLLPYHPYQRALARFWPKFADEKVLEAAWSAMCSTGDEKERALKVAREGMEKIEELIKGKKFFGGDDIGYLDIALGWISYWLPVWEEVGSMQIVDPSKCAATIAWMTKFTNHTVIKDCLPPRDEMLVYYHRRKQELSSTGHGWFKPSGDKDLRRLESGFKLVGLFVPSEVCGWFRFEKYTKLKKNEVQQPLTFDDVFFVPKAKTVDHVRVSQLSALISIMFRVSSFGSALVAQVPLVPSSLFYRGISLITMPGRSILFNRVRRVHKELVGAIGALIIGGNANFPILPRGLGVERTSSPSLKGWGALETQNQGIR 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1833 396 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 83 IPR004045 -
Glsi02g1833 396 Gene3D - 85 221 - -
Glsi02g1833 396 Gene3D Glutaredoxin 1 84 - -
Glsi02g1833 396 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 8 207 IPR045073 -
Glsi02g1833 396 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Glsi02g1833 396 SFLD Main (cytGST) 2 220 - -
Glsi02g1833 396 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 218 IPR010987 -
Glsi02g1833 396 FunFam Tau class glutathione S-transferase 85 221 - -
Glsi02g1833 396 FunFam Tau class glutathione S-transferase 1 86 - -
Glsi02g1833 396 CDD GST_C_Tau 89 210 IPR045074 GO:0004364|GO:0006749
Glsi02g1833 396 SUPERFAMILY GST C-terminal domain-like 77 216 IPR036282 -
Glsi02g1833 396 CDD GST_N_Tau 6 79 - -
Glsi02g1833 396 SUPERFAMILY Thioredoxin-like 6 105 IPR036249 -
Glsi02g1833 396 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1833 Glsi-ChrGlsi02 65225182 65233939 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1833 2 219 Glutathione S-transferase Gene Family AT2G29420 44.954 3.23e-67 211