Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1825 ATGGAAGCTACAAGGTGCTGGTTTAATAAGTTCAAGTCAAAGGACAAAGTGAAGTCTCCAAAGAACAAGGAATCTGCAGCCACTGTAAAAGAAGGGTCAAGACCACCAACAAATGAAGAAGCACCTTCAAATGTGACCAAACAGAAGGCTGCAGCTGCAAAACAGTACATAGAAAATCATTACAAGAAGCAGATGAAAAGCCTGCAGGAGAGGAAGGAGCGACGTAATATGCTAGAAAAAAAGCTGGCTGATGCTGAAGTCTCTGAAGAAGAGCAGAACAACTTGCTGAAGTATTTGGAGAAAAAGGAAACAGAATACATGCGGCTTCAGAGGCATAAGATGGGAGCTGATGATTTCGAGCCACTGACTATGATAGGGAAGGGTGCATTTGGAGAGGTTAGAGTCTGCCGAGAGAAGGCAACTGGTCATGTATATGCTATGAAGAAGCTTAAGAAATCTGAGATGCTTCGCAGAGGCCAGGTTGAACATGTAAAAGCTGAGAGGAACCTACTTGCAGAAGTTGACAGCAATTGCATTGTAAAACTTTACTGCTCCTTTCAAGATGAAGAGTATTTATATCTCATTATGGAGTATCTACCTGGGGGAGATATGATGACGTTGCTGATGCGAAAGGATACACTGACAGAAGATGAGGCCAGGTTCTATGTTGGAGAGACTGTCCTAGCTATTGAGTCAATTCATAAACACAATTATATTCATAGAGATATCAAGCCTGACAACTTGCTGCTTGATAGAAATGGTCACATGAAGTTATCAGATTTTGGATTATGTAAACCGCTAGACTGCAGTAATCTTCAGGAGAAGGACTTCTCTATTGGAAACAATTTAAGTGGAGCTCTTAGGAGTGATGGACGTCCTGTGGCACCTAAACGAACTCAACAGGAGCAACTGCAGCATTGGCAGAGGAATAGGCGAATGCTTGCCTATTCTACGGTTGGAACACCTGACTATATTGCCCCAGAAGTTCTTCTGAAGAAAGGATATGGGATGGAGTGTGATTGGTGGTCTCTAGGAGCTATAATGTATGAAATGCTTGTGGGGTATCCACCCTTTTATTCAGATGAACCGATGTCAACTTGTAGAAAGATAGTAAATTGGAGAACTCATCTAAAATTTCCAGAAGAAGCTAAACTATCTGCAGAGGCAAAAGATCTTATTTGTAGACTCCTATGTAATGTAGATCAGAGGCTTGGAACTAAAGGGGCAGATGAAATAAAGGCTCACCCATGGTTCAAAGGTATTGAATGGGACAAATTGTACCAAATGAAAGCTGCATTTATTCCTGAGGTCAATGATGAATTAGATACTCAAAATTTTGAGAAGTTTGAAGAGGTTGACAACCAAATTCAGCCTTCCTCAAAATCAGGCCCTTGGAGAAAGATGCTGTCATCTAAAGATATTAACTTTGTTGGGTACACATATAAGAACTTCGAAATTGTGAATGATCATCAACTACCTGGAATTGCTGAATTGAAGAAGAAGAGCACAAAAACCAAAAGACCATCTATCAAGACCCTGTTTGATGATGAGTCAACTATGACTGCCAATCAACCAGTCCAAGGGAGCTTCTTAAACCTCTTACCTACTCAACCAGAAGCTCCTGAGAAAAGTGAATCGCAATGA 1644 0.41 MEATRCWFNKFKSKDKVKSPKNKESAATVKEGSRPPTNEEAPSNVTKQKAAAAKQYIENHYKKQMKSLQERKERRNMLEKKLADAEVSEEEQNNLLKYLEKKETEYMRLQRHKMGADDFEPLTMIGKGAFGEVRVCREKATGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYCSFQDEEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRNGHMKLSDFGLCKPLDCSNLQEKDFSIGNNLSGALRSDGRPVAPKRTQQEQLQHWQRNRRMLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDEPMSTCRKIVNWRTHLKFPEEAKLSAEAKDLICRLLCNVDQRLGTKGADEIKAHPWFKGIEWDKLYQMKAAFIPEVNDELDTQNFEKFEEVDNQIQPSSKSGPWRKMLSSKDINFVGYTYKNFEIVNDHQLPGIAELKKKSTKTKRPSIKTLFDDESTMTANQPVQGSFLNLLPTQPEAPEKSESQ 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1825 547 FunFam Non-specific serine/threonine protein kinase 203 270 - -
Glsi02g1825 547 Gene3D Phosphorylase Kinase; domain 1 117 202 - -
Glsi02g1825 547 Gene3D Phosphorylase Kinase; domain 1 437 447 - -
Glsi02g1825 547 Coils Coil 68 95 - -
Glsi02g1825 547 Pfam Protein kinase C terminal domain 437 481 IPR017892 GO:0004674|GO:0005524|GO:0006468
Glsi02g1825 547 MobiDBLite consensus disorder prediction 14 28 - -
Glsi02g1825 547 MobiDBLite consensus disorder prediction 14 51 - -
Glsi02g1825 547 PANTHER SERINE/THREONINE-PROTEIN KINASE 11 477 - -
Glsi02g1825 547 FunFam Non-specific serine/threonine protein kinase 90 202 - -
Glsi02g1825 547 Pfam Protein kinase domain 121 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1825 547 MobiDBLite consensus disorder prediction 517 547 - -
Glsi02g1825 547 ProSiteProfiles AGC-kinase C-terminal domain profile. 419 491 IPR000961 GO:0004674|GO:0005524|GO:0006468
Glsi02g1825 547 CDD MobB_NDR_LATS-like 53 114 - -
Glsi02g1825 547 FunFam Non-specific serine/threonine protein kinase 317 436 - -
Glsi02g1825 547 SMART serkin_6 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1825 547 CDD STKc_NDR_like 117 482 - -
Glsi02g1825 547 SUPERFAMILY Protein kinase-like (PK-like) 93 470 IPR011009 -
Glsi02g1825 547 ProSitePatterns Serine/Threonine protein kinases active-site signature. 238 250 IPR008271 GO:0004672|GO:0006468
Glsi02g1825 547 Gene3D Transferase(Phosphotransferase) domain 1 203 268 - -
Glsi02g1825 547 Gene3D Transferase(Phosphotransferase) domain 1 317 436 - -
Glsi02g1825 547 ProSiteProfiles Protein kinase domain profile. 119 418 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1825 547 ProSitePatterns Protein kinases ATP-binding region signature. 125 148 IPR017441 GO:0005524
Glsi02g1825 547 SMART pkinase_C_6 419 483 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1825 Glsi-ChrGlsi02 64962183 64970567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1825 1 541 AGC Kinase Gene Family AT4G14350 84.473 0.0 936
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Glsi02g1825 Pkinase 8.3e-65 CL0016