Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1733 ATGGGGAGAATGGGACAAGAATCAGATTTCAAAACCCAGTTAGTATTAGAAATTTGCTCCATTTCCACTCGCTCTGTGGTATGCATCCATAGGCTTCTCTCAAACCCACCTAAGGCATCCCCTTTCATCGATTGGTATCACATTCTTGGAGTGGAAGAAAATGCAGGGGTAAATACCATTCGCAAGCGATACCATAAGCTGGCATTGCAACTTCACCCAGATAAGAATAAACATCCCAAGGCTGAAATTGCGTTCAAGCTTGTCTCTGAGGCATATACATGTTTGTCTGATGCTGCAAAGAGAAAAGCCTTTGAGTTGGAGAGATGGAAGAACTTCTGCTTTGAGTGCAAGGGGATCCAATATTCATCATCTGGAGGCAATGTCCCTCGCAATTCCCATGGTGGTTCAAGTTTCAAGGTGTGGAATATTATCAGCAGGTCAAGATCTTATAAACTTCGGAGAAATATTAAAGAAATTAGAGAAAGATTTAAGGAGGAGGCTAAGGTGATAGAGAACTGTTTACGAGCGAATTCAATGTCAAGAAGAGAATTTCCACTCTATAATCCAGCTGATTATCTAGAAAGAAGCAAGTCTCAACACAAAGTTGAGAAAGAAACCCCGGTTTTTGATCCCTCTGACTACCTGTACCAAGGCTACCCTCATCTGAGGAGTCAAATTTACAAGAATTCTGAGTCATTTTGGTTCTTGCAGACAGAAAGTATACTGCACAATGACAGGGGAGGAGCCAAACACGACTCCCCAGTTTTTGAAGTCAAATCAGATAGGAGGATGTTTACAAGCAAATTTCCTTATGTCCCATCATGA 825 0.4158 MGRMGQESDFKTQLVLEICSISTRSVVCIHRLLSNPPKASPFIDWYHILGVEENAGVNTIRKRYHKLALQLHPDKNKHPKAEIAFKLVSEAYTCLSDAAKRKAFELERWKNFCFECKGIQYSSSGGNVPRNSHGGSSFKVWNIISRSRSYKLRRNIKEIRERFKEEAKVIENCLRANSMSRREFPLYNPADYLERSKSQHKVEKETPVFDPSDYLYQGYPHLRSQIYKNSESFWFLQTESILHNDRGGAKHDSPVFEVKSDRRMFTSKFPYVPS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1733 274 PRINTS DnaJ domain signature 80 100 IPR001623 -
Glsi02g1733 274 PRINTS DnaJ domain signature 64 79 IPR001623 -
Glsi02g1733 274 PRINTS DnaJ domain signature 46 64 IPR001623 -
Glsi02g1733 274 PANTHER BNAC03G44070D PROTEIN 23 242 - -
Glsi02g1733 274 Pfam DnaJ domain 44 104 IPR001623 -
Glsi02g1733 274 SUPERFAMILY Chaperone J-domain 36 107 IPR036869 -
Glsi02g1733 274 Gene3D DnaJ domain 43 165 IPR036869 -
Glsi02g1733 274 CDD DnaJ 44 97 IPR001623 -
Glsi02g1733 274 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Glsi02g1733 274 SMART dnaj_3 43 100 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1733 Glsi-ChrGlsi02 57346244 57347565 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1733 26 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 38.636 1.04e-09 56.6