Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1709 ATGGCTTCGGATTCCCGTTGCTGCTGCTTGTTCAGGGTCGTCGTTTTATTCATCTTCTCTATTCCCTCGATTTCTCTGGCCCAGTCTGCCAATTCCTGCAACGGTATATTCTTGTCCTACGCATACGCAGGCGGAAAGCGGCTACCGCCCAATGTCTCCGATCCGGCGGAGCAACCGTACCGATTCGAGTCCACGCTTACTGTGCTCAACAACGGACTCGACCAGCTCAAATCCTGGAAGGTGTTCGTGGGGTTCCAGTATGACGAGTTCTTGGTCTCTGCATCGAACGCAGTGCTTGCAGATGGCACTAGCCTCCCTGGTGGTGTTGGAAATGGAACCGTTTTTGCTGGGTACCCCATGACCGATCTGAAGACGGCGGTGGAGACTGCAGGGGACTCGACCCAGATGCAGGTTCAGATCGACTTGGTGGGTACGGTGTTCGGTGTGGCACCCCCCAACGTGCCTATGCCGTCAAACATTACCCTGGCTAATGATGGATTCGTCTGCCGAAAGCCCACTGGTCAAGGTAAGAATCAAACTAGTGTCTGTTGCACAAAAGATCCCAAGTTCAAAACAAATGTCACCACAGATGAAGAATTCCTGCCTCGCCAAAATGGTGATCTTACGATTATGTATGATGTGATCAGAACTTATGATTCCAGTTACTGGGCAGAAGTTACTATCTCAAACCATAACCCCCTTGGCCGTCTTGACAACTGGAGATTAAGCTGGGACTGGATGCGGGATGAGTTTATTTATTCAATGAAGGGGGCTTATCCATTGAATGTGGATTCTTCTGACTGTGTATTTGGCCAGCAAGGCACATACTACAAGGAGCTTGACTTTTCTAATGTATTGAATTGTGAAAGAAAGCCAACAATAATTGATCTCCCTCCCACAAAGTTCAATGACTCAGACCTGGGGAAGATTCCTTTTTGCTGCCGGAATGGTACAATCTTGCCACCGTCAATGGACCCAAGCATGTCAGCTTCAAGATTCCAAATGCAGGTCTTTAAAATGCCCCCAGACCTCAATCGCTCCCAGCTTTCACCTCCACAAAACTGGAAGATAAGTGGTACACTCAACCCTGACTACAAATGTGGCCCTCCCGTCCGGGTAAGTCCTAGTGAATACCCAGATTCAACAGGCTTACCATCAAACAAATCTGCAATGGCCAGCTGGCAGGTTGTTTGCAATATAACACAGGCCAAAGGAGCTGTACGTAAATGCTGTGTCTCATTTTCTGCATATTACAATGATTCCGTTATACCTTGCAAAACATGCGCATGTGGATGCCCCAGTAACACAGGCAGAACTTGCAGTGCTACCACACCAGCCATGTTTCTTCCACCCGAAGCACTTCTTGTTCCTTTTGAGAATCGGAGTGCCAAGGCTGTTGCTTGGGCTGGTCTGAAACATCTACCCATGCCAAACCCAATGCCATGTGGTGATAACTGTGGTGTGACCATAAACTGGCATGTTTTTACAGACTACAGCCGAGGATGGAGTGCAAGGGTCACACTTTTCAATTGGGGTGAGACTAATTTTGCTGACTGGTTTGCTGCAGTTCAAATGGACAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCATTCAATGCAAGCACCTTAGACGGCGCTAAAAATAATACAATAATAATGCAAGGCGTTACAGGATTGAACTACCTTGTGGCAGAAACAGACGGAGCAAACCCTCTGAAAGATCCTAGGATGCCTGGTAAGCAACAATCAGTAATCTCTTTTACGAAGAAAGCGACTCCTGGAATCAATGTACCTGGTGGAGATGGGTTTCCTACTAAAGTCTTCTTCAATGGAGAGGAATGCTCACTTCCCTCAGTATATCCAACCAGTGGATTCAAAAAGGAATCTTCCCTATCTACTTCACTGCTCCTAACACTGCTGCTGTTCGTATTGATGTGGCATAGTGACAATGTTTGGTAA 1959 0.4722 MASDSRCCCLFRVVVLFIFSIPSISLAQSANSCNGIFLSYAYAGGKRLPPNVSDPAEQPYRFESTLTVLNNGLDQLKSWKVFVGFQYDEFLVSASNAVLADGTSLPGGVGNGTVFAGYPMTDLKTAVETAGDSTQMQVQIDLVGTVFGVAPPNVPMPSNITLANDGFVCRKPTGQGKNQTSVCCTKDPKFKTNVTTDEEFLPRQNGDLTIMYDVIRTYDSSYWAEVTISNHNPLGRLDNWRLSWDWMRDEFIYSMKGAYPLNVDSSDCVFGQQGTYYKELDFSNVLNCERKPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPDLNRSQLSPPQNWKISGTLNPDYKCGPPVRVSPSEYPDSTGLPSNKSAMASWQVVCNITQAKGAVRKCCVSFSAYYNDSVIPCKTCACGCPSNTGRTCSATTPAMFLPPEALLVPFENRSAKAVAWAGLKHLPMPNPMPCGDNCGVTINWHVFTDYSRGWSARVTLFNWGETNFADWFAAVQMDKAAAGFEKMYSFNASTLDGAKNNTIIMQGVTGLNYLVAETDGANPLKDPRMPGKQQSVISFTKKATPGINVPGGDGFPTKVFFNGEECSLPSVYPTSGFKKESSLSTSLLLTLLLFVLMWHSDNVW 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1709 652 Pfam COBRA-like protein 222 401 IPR006918 GO:0010215|GO:0016020
Glsi02g1709 652 PANTHER COBRA-LIKE PROTEIN 7 28 645 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1709 Glsi-ChrGlsi02 51929668 51932171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1709 18 632 COBRA Gene Family AT4G16120 67.937 0.0 898