Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1696 ATGACCACGTATTCCTTAGTTCATTTGATTATCTTCCTCATTTGCCTGGCTTTCAGGTTGAAACATCTGCGAACCAATCCTACTGTAATTTTTAAGGACAGAATGTCAAAAGGAACAAGTTTAGTATTGGAATCATCTGAAAATGGTACAGATTTGTCTCAGGATGATATTGGCACCATTGAAGAAATACCAGAAGAGTCAATTTTGTCACGACAAACTTCAGTGAACCTTGTTCCTTTTATTGGTCAAAGATTTGTTTCTCAAGAAGCTGCTTATGAATTCTATTGCAGTTTTGCAAAACAATGTGGCTTTTCTATTAGACGACACCGTACTCGAGGAAAAGATGGGGTTGGCCGGGGAGTTACTAGAAGGGATTTCACTTGCCATCGTGGTGGGTATCCCCAGATTAAGCCATCTGATGATGGAAAGATGCAAAGAAATCGCAAATCTTCACGCTGTGGTTGTCAAGCATACATGCGTATTGTCAAAAGGGCAGATTTTGATGTCCCTGAATGGCGTGTTACTGGCTTTAGCAACATCCACAATCATGAGTTGTTAAAATCTAATGAGGTGCGTCTTCTTCCAGCATACTGTACAATATCTCCAGATGACAAGAGCCGTATATGCATGTTTGCTAAAGCTGGAATGTCAGTGAGGCAAATGTTAAGATTGATGGAACTAGAGAAAGGCATCAAGCTTGGTTGTTTACCTTTTACAGAGATTGATGTGAGAAACCTGTTGCAGTCTTTCAGAAATGTTGATAGAGATAATGATGCTATTGATCTTATTGCTATGTGCAAGAGATTAAAAGATGAAAATCACAACTTCAAGTATGAATTTAACATAGATTGTAATAACAGGCTAGAGCATATTGCCTGGTCCTATGCTTCTTCTATCCAATCTTATGAGGAATTTGGAGATGCTGTTGTTTTTGATACAACCCACCGTCTGGATGCCTATGACATGCTGTTGGGAATTTGGCTTGGAGTGGATAATCATGGAATGACTTGTTTCTTTGGTTGTACACTTCTACGGGATGAAAATATGCAGTCTTTTTCATGGGCTCTAAAGGCATTCTTGGGCTTCATGGAAGGAAAGGCTCCTCAATCAATATTAACTGATCATAACATGTGGCTTAAAGAAGCTATTGCTGTTGAAATACCTGAAACCAAACATGCCTTTTGCATATGGCACATTATTGCTAAGTTCTCTGACTGGTTTTCTGTACTTCTTGGATCACATTATGATGAGTGGAAAACTGAGTTCCATCAGCTCTACAATTTGGACCTGGTGGAAGATTTTGAAGAAGGCTGGAGGCGAATGGTTGACAAATATGGACTCCATGCAAATAAGCATATTGTTAGCTTATATTCATTAAGGACATTTTGGGCTTTACCATTCTTGAGGTGCTACTTCTTTTCAGGATTGACCAGCACATGTCAGTCTGAGTCCATTAATGCTTTTATCCGGCGGTTCTTGAGTGCCCAATCTCAACTAGATCGTTTTGTAGAGCATGTGGCTGATATTGTTGAATTTAATGACCGGGCTGGAACAAAGCAAAAGATGCAACGAAAACTGCTGAAAGTTTGCCTCAAAACTGGTTCACCTATTGAATCCCACGCTGCCACCGTGCTTACTCCTTATGCATTTAGTAAACTCCAGGATGAGCTAGTTTTGGCCCCACAATATGCATCTTTTCTGGTTGATGAAGGTTGTTTCCAGGTCAGACACCACACTCAGATGGAGGGTGGGTGTAAAGTATTTTGGGTTCCTTGTGAAGAGCACATCAGCTGCAGCTGCCATCTATTTGAGTTTTCAGGCATCTTATGTAGACATGTTCTGCGTGTCTTGTCAACTAATAACTGTTTTCACATCCCTGAGCAATATCTACCTGCCCGTTGGCATGGTGTCAGCTCATCTTCAGCTAACCTCTTCCGGGGTACAACTTCAAGGGATCATCCTGAAAGAATACAATTTCTGGAATCCATGGTTTCAATGCTTGTAATGGAATCCATTGAATCAGAGGAACGACTTGATGTTGCTTGTGAGCAAATTTCCATGGTTTTATCACGTATCAAAACCCTTCCTAGGACGACACATGGGGTGAATGACATTGCGTACAATTATCAATCAGATTCATTGATTCTACCAGAGGTGGAAGATGCTGATGGTATAATTCATGGTTTTACAATTGCAAATCCCCATGATTCTATCACTTTAGGAAAACTTAAGGAGAGAAAGGCAAGAGATGGAGTCGATATCACTAGAAAGCGAAGACATTTTTCAGGGCAGTTGTGTGGGCAATATGGACATGATGCATCTGATTGCTCGACAATGGGTGGGGACAATTTGAATGGAGATGCCCTAGGGTACTCATAG 2379 0.4069 MTTYSLVHLIIFLICLAFRLKHLRTNPTVIFKDRMSKGTSLVLESSENGTDLSQDDIGTIEEIPEESILSRQTSVNLVPFIGQRFVSQEAAYEFYCSFAKQCGFSIRRHRTRGKDGVGRGVTRRDFTCHRGGYPQIKPSDDGKMQRNRKSSRCGCQAYMRIVKRADFDVPEWRVTGFSNIHNHELLKSNEVRLLPAYCTISPDDKSRICMFAKAGMSVRQMLRLMELEKGIKLGCLPFTEIDVRNLLQSFRNVDRDNDAIDLIAMCKRLKDENHNFKYEFNIDCNNRLEHIAWSYASSIQSYEEFGDAVVFDTTHRLDAYDMLLGIWLGVDNHGMTCFFGCTLLRDENMQSFSWALKAFLGFMEGKAPQSILTDHNMWLKEAIAVEIPETKHAFCIWHIIAKFSDWFSVLLGSHYDEWKTEFHQLYNLDLVEDFEEGWRRMVDKYGLHANKHIVSLYSLRTFWALPFLRCYFFSGLTSTCQSESINAFIRRFLSAQSQLDRFVEHVADIVEFNDRAGTKQKMQRKLLKVCLKTGSPIESHAATVLTPYAFSKLQDELVLAPQYASFLVDEGCFQVRHHTQMEGGCKVFWVPCEEHISCSCHLFEFSGILCRHVLRVLSTNNCFHIPEQYLPARWHGVSSSSANLFRGTTSRDHPERIQFLESMVSMLVMESIESEERLDVACEQISMVLSRIKTLPRTTHGVNDIAYNYQSDSLILPEVEDADGIIHGFTIANPHDSITLGKLKERKARDGVDITRKRRHFSGQLCGQYGHDASDCSTMGGDNLNGDALGYS 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1696 792 ProSiteProfiles Zinc finger SWIM-type profile. 588 621 IPR007527 GO:0008270
Glsi02g1696 792 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 74 655 IPR031052 GO:0006355
Glsi02g1696 792 Pfam SWIM zinc finger 592 619 IPR007527 GO:0008270
Glsi02g1696 792 SMART 26again6 596 623 IPR006564 GO:0008270
Glsi02g1696 792 Pfam MULE transposase domain 309 401 IPR018289 -
Glsi02g1696 792 Pfam FAR1 DNA-binding domain 93 186 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1696 Glsi-ChrGlsi02 50889178 50892232 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Glsi02g1696 MULE 2.6e-20 CL0219