Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1687 ATGTGTGGGGGTGCTATCATTTCCGACTTCATTGCCGTGAATCGTGGCCGGAAATTGACGGCCGGCGACCTCTGGTCCGAGTTCAACACTCTCTCTGATCTCCTTGGCTTTGACAGTAGCGCCAATTCTACCAAACACCACCAACCTACCAACTTTGATCAAAACCTTCCTCAAATCCAAATAGACAAAGGAGTGACACATGACAAGGCGGAGAAGAAAAGCGTGGGTGCAGAGAAGGCAACAGGAGAAGGAAGGAGGCGTACTCAGGCTCAGAGGGCTCGCAAGAACATGTACAGAGGAATCAGGCAGAGGCCATGGGGCAAGTGGGCGGCCGAGATAAGGGACCCCCACAAGGGTGTCCGAGTCTGGCTCGGTACCTTTAACAATGCCGAAGAAGCCGCCAGAGCATACGACGAAGCCGCCAAGCGCATTCGCGGCGACAAGGCCAAGCTCAATTTCCCCCACCAACCTCCACCTGCAGCTCCGGCTCCGGAGCGACCAGCCAAGAAGCGGTGCCTTAGTCCTGAGCTGAGTCAGTCGTGCAACCGACCCACCGGGCCACCACCGCCATTCATAGGGGGATATGAATGTCCACAAGCAGTTGATGTGGGCGACCTGGTGCTGAAGCAGCAAATCTCAAGTCTTGAATCTTTGCTGGGTTTGGAGCCTGAGGAGGAGCTGCAGCAGCTGGGTGAGCAAGTGAATGGAATCGGCGGCGGTGCCGGTGGCGAGTGGGAGTCGACGGACCTATGGATGTTGGACGACGTCGTAATGCATCACCTGCACAATCGCCACCTGGTTTACTAG 807 0.5626 MCGGAIISDFIAVNRGRKLTAGDLWSEFNTLSDLLGFDSSANSTKHHQPTNFDQNLPQIQIDKGVTHDKAEKKSVGAEKATGEGRRRTQAQRARKNMYRGIRQRPWGKWAAEIRDPHKGVRVWLGTFNNAEEAARAYDEAAKRIRGDKAKLNFPHQPPPAAPAPERPAKKRCLSPELSQSCNRPTGPPPPFIGGYECPQAVDVGDLVLKQQISSLESLLGLEPEEELQQLGEQVNGIGGGAGGEWESTDLWMLDDVVMHHLHNRHLVY 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1687 268 ProSiteProfiles AP2/ERF domain profile. 97 154 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 MobiDBLite consensus disorder prediction 66 90 - -
Glsi02g1687 268 SMART rav1_2 97 160 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 FunFam Ethylene-responsive transcription factor 2 96 155 - -
Glsi02g1687 268 SUPERFAMILY DNA-binding domain 97 155 IPR016177 GO:0003677
Glsi02g1687 268 Gene3D AP2/ERF domain 97 156 IPR036955 GO:0003700|GO:0006355
Glsi02g1687 268 PANTHER DNA-BINDING DOMAIN 58 174 IPR044808 GO:0003700|GO:0009873
Glsi02g1687 268 MobiDBLite consensus disorder prediction 66 97 - -
Glsi02g1687 268 PRINTS Ethylene responsive element binding protein signature 120 136 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 PRINTS Ethylene responsive element binding protein signature 98 109 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 CDD AP2 98 153 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 Pfam AP2 domain 98 146 IPR001471 GO:0003700|GO:0006355
Glsi02g1687 268 MobiDBLite consensus disorder prediction 150 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1687 Glsi-ChrGlsi02 49228282 49229751 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1687 1 260 AP2-EREBP Transcription Factor Family AT3G16770 44.326 2.11e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Glsi02g1687 AP2 5.8e-14 CL0081