Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1664 ATGGCTGGTAGTGACCACGAGAAGAAGAAGAGGTACGCCATTCTTGGCATCTCTTCCATCCTTCTTGTGGCTATGATAGCTGCTGTGGCCGTTGGTTTATCCAGCGGAACGGATAATGTGGAAGCGGATGATGTTACTGAACCTGGTGAAACTGAGATTGCAACGTCCCAAAAGAACGTGGATGTGTTTTGCCATTCAGCTGAATACAAAGAAACCTGCAAGAAGAGCCTTTCAAAAGTGTCCTCAAATGAAACGGACATAAAAGCGCTGATTAAAGAGGCATTCCACGCCACCGCCAAGGAGCTCCGAACGCACATAAAAAACTCGACCTTGTATGAAGAGTTGTCCAAGGATAACATGACCAAACAGGCTATGCAGATCTGCCACGAGGTCTTGGACTACGCTGTTGACGATATTAGGAACTCTATGGATAAGTTGGATACGTTTGATATCAACAAAATCGGTGACTACGCCTATGACATTAAGGTTTGGCTCGGAGCTACCATCTCCCATCAACGCACTTGCTTAGATGGGTTTGAGAACACAACCACACAAGCCGCGGAGACCATGACCAAGGTGTTGAACACCTCCATGGAGCTCAGTATGAATGGGTTGGATATTATCACTGCCCTCTCCGATCTGGCCCAAGCTATTGATTTAGACTTCGACGGCGGCGCCAGCAAAGCTAACAGGAAACTTCTGTCGTCGGAGGGTATCCCTTCATGGGTCAATGAAGGCCAACGAAGGTTACTTAATGTTGGTCCCGGCGCCAACGGCATTAAGCCCGACGTTGTTGTGGCTCAGGATGGAACTGGCAAGTTCCTAACACTCAATGATGCTCTTAAGATGGTTCCCCGGAGAAATGTCAAGCCCTTTGTGATTTACGTTAAGGCTGGTATATACAATGAGATAGTGATCTTACAGAAGTATATGAAATTGGTCACTATCATCGGAGATGGTCCCACGCTAACCAGATTTGTTGGCGGGCTCAATTATGTGGATGGTGTCAACACTTATAACACGGCAACATTCGGCGTGAATGCTGCCAATTTCATGGCTATGCATGTGGGGTTCGAGAACAATGCAGGAGCACTTAAGCATCAGGCTGTGGCACTTCGGGTAACAGCGGACAAGGCAATCTTCTTCAACTGCCATATGGATGGGTACCAAGACACCCTTTATGCGCAATCACGTCGCCAGTTCTACCGTGACTGTTCTATCTCCGGCACCATCGACTTCATCTTCGGTGACGCGGATGCTGTTTTCCAGAACTGCAGACTTATTGTGAGGCAGCCCTTGGGAAACCAGAACTGCATCGTGACAGCGGGAGGCAGGGACGTGATCAACAGCCCTAGTGCATTGGTGTTCCAGAGCTGCCATTTCACTGCGGACCCACTGTTCCTGGCTGACCCAGCAAGGAAACCAGCTTACCTAGGAAGGCCATGGAGGCCATATGCAAGGACAGTGATCATGGATTCTCAGATTGACGACATTTTTGCACCCACAGGCTACCTGTCATGGATGGGCAGTCTTTATCATTTGACGTGTCTCTACTATGAGTTCAACAACAACGGTCCCGGTGCTACTGATGCTCGCAGAGTGAAATGGCCTGGGGTCAAGACGATCACCCCTTCGGAAGCTGCTGATTACTATCCCAAAAGGTTCTTTGAACTCAACAATGCAAATGACACTGATTCATGGATCGTGGCATCTGGGGTCCCCTACTCCCTTGGTCCCATTCCCGCGGAAAATATTCCCTTGCGAAAGTAA 1770 0.4881 MAGSDHEKKKRYAILGISSILLVAMIAAVAVGLSSGTDNVEADDVTEPGETEIATSQKNVDVFCHSAEYKETCKKSLSKVSSNETDIKALIKEAFHATAKELRTHIKNSTLYEELSKDNMTKQAMQICHEVLDYAVDDIRNSMDKLDTFDINKIGDYAYDIKVWLGATISHQRTCLDGFENTTTQAAETMTKVLNTSMELSMNGLDIITALSDLAQAIDLDFDGGASKANRKLLSSEGIPSWVNEGQRRLLNVGPGANGIKPDVVVAQDGTGKFLTLNDALKMVPRRNVKPFVIYVKAGIYNEIVILQKYMKLVTIIGDGPTLTRFVGGLNYVDGVNTYNTATFGVNAANFMAMHVGFENNAGALKHQAVALRVTADKAIFFNCHMDGYQDTLYAQSRRQFYRDCSISGTIDFIFGDADAVFQNCRLIVRQPLGNQNCIVTAGGRDVINSPSALVFQSCHFTADPLFLADPARKPAYLGRPWRPYARTVIMDSQIDDIFAPTGYLSWMGSLYHLTCLYYEFNNNGPGATDARRVKWPGVKTITPSEAADYYPKRFFELNNANDTDSWIVASGVPYSLGPIPAENIPLRK 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1664 589 Pfam Plant invertase/pectin methylesterase inhibitor 60 201 IPR006501 GO:0004857
Glsi02g1664 589 PANTHER PECTINESTERASE 19 568 - -
Glsi02g1664 589 ProSitePatterns Pectinesterase signature 2. 407 416 IPR033131 -
Glsi02g1664 589 Gene3D Invertase/pectin methylesterase inhibitor family protein 54 212 IPR035513 -
Glsi02g1664 589 SMART PMEI_2 55 207 IPR006501 GO:0004857
Glsi02g1664 589 NCBIfam pectinesterase inhibitor domain 55 211 IPR006501 GO:0004857
Glsi02g1664 589 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 212 IPR035513 -
Glsi02g1664 589 FunFam Pectinesterase 56 212 - -
Glsi02g1664 589 FunFam Pectinesterase 4 260 579 - -
Glsi02g1664 589 Pfam Pectinesterase 263 556 IPR000070 GO:0030599|GO:0042545
Glsi02g1664 589 SUPERFAMILY Pectin lyase-like 260 576 IPR011050 -
Glsi02g1664 589 ProSitePatterns Pectinesterase signature 1. 288 307 IPR018040 -
Glsi02g1664 589 CDD PMEI-like_3 63 212 - -
Glsi02g1664 589 Gene3D - 260 580 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1664 Glsi-ChrGlsi02 45154757 45157087 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1664 5 578 Carbohydrate Esterase AT3G05610 43.206 1.07e-178 519