Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1658 ATGATGAACGGAAGGCACAGGTTCCCCTTTTCTCCGTCACAGTGGCAAGAACTTGAACATCAAGCTCTTATTTTCAAGTTTATAGCTTCAGGTATCCCCATCCCACCTGATCTCTTCATCATCAAAAGAAGCTCTTTGGACTCTTCTCTGTCTTCAATGCTTTTGTCTCATCAACCTCAACGCTGTAGGCATTTTATCTCTCTTGCTTTGTGTCAGTTTGTGTACAAGCAGGTGGAACTATTTGCCAATGGGTTTGGGAAGAAAAATAGACCCAGAGCCAGGGAGGTGCAGAAGAACAGATGGGAAGAAATGGAGGCTAACACCGACTGCAGGTATGTTTATGGACTGAAAGAGGATGTGGACGAGCATGCTTTCTTCACAGAGCCTTCTGGGACTATGAGAAGCTTCTCTGCTTCATCTATGGATGACTCTTGGCATCTCACACCGCTGACAATGGGCTCCTAG 465 0.4581 MMNGRHRFPFSPSQWQELEHQALIFKFIASGIPIPPDLFIIKRSSLDSSLSSMLLSHQPQRCRHFISLALCQFVYKQVELFANGFGKKNRPRAREVQKNRWEEMEANTDCRYVYGLKEDVDEHAFFTEPSGTMRSFSASSMDDSWHLTPLTMGS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1658 154 Pfam QLQ 9 39 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi02g1658 154 PANTHER GROWTH-REGULATING FACTOR 5 8 63 IPR031137 GO:0005634|GO:0006351|GO:0032502
Glsi02g1658 154 SMART QLQ_2 8 43 IPR014978 GO:0005524|GO:0005634|GO:0006355
Glsi02g1658 154 ProSiteProfiles QLQ domain profile. 9 44 IPR014978 GO:0005524|GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1658 Glsi-ChrGlsi02 43850846 43851852 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1658 7 113 GRF Transcription Factor Family AT3G13960 41.441 2.53e-18 78.6