LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g1655	ATGGGAGCTGAGAAGGAAGGGACAAAAAGTGGAGTTGGTGGTTTTTTCCAGTTGTTTGACTGGACCTCAAAATCTCGGAAGAAATTATTTACTACCAAGTCAGATTTACCAGAGTCTTCAAAACAGCAAAAAAAAGTTGACGGTAACTTGGCAATGACACAATCCTATATGGTGGATGAAGTTGGAATTGGAGCAGGGGGAAGTTTTAGAGGAAGTAGTGATCGTAGTTATGCTTCATCAGTTACAGATGATGAAGTATCTGGAACAAGGGTCCCTAGCGTAGTTGCTAAGCTTATGGGATTAGATTCTTTACCCCCTTCCAGTTTTCCTGAGCCCTATTCTACTCCATATTTTGATATCCAATCTCTTCAAGATGCTCAATACGGCAGGAGAAACCTCAATTATAGGCAAGATCAGACCATTTATTCTGGAAGTTTGCTGGAAAAAGTTGAGGGCTCTTCTAGTAACTTCATGGAGCAAAAGCCTCAAAAGACCCTTAGGAGGCCAATTGAAAAGTTCCAAACAGAAGTGTTGCCTCCAAAGTCAGCTAAATCAATTCCTGTTACACACCATAAGCTGTTGTCCCCTATCAAGAATCCTGGCTTTGTTCCAACCAATAATGCTGATTATATAATGGAGGCTGCAGCAAGAATTATTGATCCTGGTTCCCAAGCTACTGCAAAGGCTAAAAGACCTCAGATAGCTTCTTCTGTTGTATCGTTGAAGGTTAGAGATCTTAAAGAAAAAGTGGAGGCTTCACAAAAAGGACCTCCCTCTCGGGCAATGACCTATAGAACTAGAGATCTGAAAGAAAAAAGAAATGTTTCTCATCGAACAACTAGGATTTCTGAACCTTCTCAACAATCAATTGAGTCAAATGCTGCCAAGTATCTCAAGGGACAATCTTTGAACAAAAGCTGGAATGGATCTGTGGATACATCCATAAGATATACTCATGTACAAGAAGATTCTTCTTTAAAGAATAAGTCTATTTCGCTTGCAATCCAAGCAAAAGTGAATGTTCAAAGAAGGGAAGGTTTGAGTTTGAATGGAGGCAGAAGTTTGGTGGATCAGAAAGAACATCTTGAAGTTAAACCCAACCCACCATTCAAGACAAATGTTCAAAAGAATTTGTATAAAAAAACTTCTGTACAGAATGCTTCTGGTGTTCTCCTGCAAAATAATCAGAAACAGAATTGTTCAACTGATAAGGGAAAACTACCATCAAAGCCATTGGTTTCCAATTCACACAGTAGAAAAGTTCTGTCAGGGGATTCCTCTTATGGACATCATAGAAGTTCTAGTTGTAGATCTATTGGGAAATCTAAAGTTGGATCCAGGAAGTCAGGCTTGGGATTGACAGATTGTGAAAAGGAAGTTTTATATACCAGTACAAACAATTTCCCTAGAAAGAAAAGGTCCACAGATAGGGACCGGAATGATAGGGTTGTTGATAACATGTTCATTGACAAAACTCAGAAGCCTGTTCAGTCTAATTTCGTAAGTAGCAACTTAAGTTGGGCTGAAGAAGTCAAAAGGAAAGGCATGGATGTAGTTTCCTTCACGTTTACCACACCAATGACAAGAAACAATGCTGGTTTTGAGACATCTGGGCAAGCTGGTCAGAAGACTAATGGTCTTTCCCTGGATCATGGCATGAAAAGAGTATTGCTTGACTCAGATAGTGCAACATCTCCGGTAGGATTCAATATGATAGGTGGTGATGCCTTAGGTATTCTTTTGGAACAGAAACTGAGGGAGTTAACCTATGGCATTGAGACTTTAGGTCATAACTCTTTTAAAGGAAGTTCACCTTCCAGTATTGCATCAAACTCAATAGAGGTGGTGCCCTCCCTCAGTTCGGTTAACATCACACCGAGATTGCAACAAAAGGACCAAGATGTGCTATTTACAGATGATTTATGTACCAGACAACATTCTGACATCTCCCACACTGGTCTTCCTGAAATAACTTCAAAACATGAGTCATGGGTTATTGATGGGGTGGAGGAGTGTAGGATCAATCAAATGGAATCACAGTCATTAAATTGCCGACACCCAAGTCCAATCTCTGTTCTTGAACCTTCTTTCTCAACTGAAAGTTGTGAATCTCTAGTCAGCACAGATGGTACTACTAATAGTACAGGAGAAAGAAAGTTCCTAGCTCAGGGCTGGAATTCCTCACGCAAGTTTTATCATGCAGAGTTATTAGATTCAGCTTCTTCAACATCAGCTGGAACCATAGTAAAGAAGTGCGCAAGTATATTTTCTATAATGAAGTTTGCAACATCAACAACATGGGAGTTGGACTATGTAAAAGAAATATTGTGCAATGTGGAATTGATGTTTATGGACTTTACCCTGGATCGAGCACGGGAGATCGTAAACCCCCATTTATTCAATCAGTTGGAAAGTCGGAAAGAACTGTTTGAGAGTGATGGTGGTGAGTCCAGGATGAGCAGGAAAGTTATATTTGATTGTGTGAGTGAATGTTTGGACTTAAGATGCAGGCGTTATGTTGGTGGGGGATACAAAATGTGGTCCAAAGGGGTTAGAATGGTGAGAAAAAATGAATTGTTGGCAGAGGAAGTGTACAAGGAGATCTCAGGTTGGAGAGGCATGGGCGATTCAATGGTTGATGAGCTTGTAGACAAGGACATTAGCAGCCAGTACGGAAGATGGCTAGATTTTGATGTTGATGCTTTTGAACTCGGAGCAGAGGTTGAGGATCGGATATTTAATTCCTTAATTAACGAAGTTGTTTCTCAAATCTTGCAACCATAA	2784	0.4016	MGAEKEGTKSGVGGFFQLFDWTSKSRKKLFTTKSDLPESSKQQKKVDGNLAMTQSYMVDEVGIGAGGSFRGSSDRSYASSVTDDEVSGTRVPSVVAKLMGLDSLPPSSFPEPYSTPYFDIQSLQDAQYGRRNLNYRQDQTIYSGSLLEKVEGSSSNFMEQKPQKTLRRPIEKFQTEVLPPKSAKSIPVTHHKLLSPIKNPGFVPTNNADYIMEAAARIIDPGSQATAKAKRPQIASSVVSLKVRDLKEKVEASQKGPPSRAMTYRTRDLKEKRNVSHRTTRISEPSQQSIESNAAKYLKGQSLNKSWNGSVDTSIRYTHVQEDSSLKNKSISLAIQAKVNVQRREGLSLNGGRSLVDQKEHLEVKPNPPFKTNVQKNLYKKTSVQNASGVLLQNNQKQNCSTDKGKLPSKPLVSNSHSRKVLSGDSSYGHHRSSSCRSIGKSKVGSRKSGLGLTDCEKEVLYTSTNNFPRKKRSTDRDRNDRVVDNMFIDKTQKPVQSNFVSSNLSWAEEVKRKGMDVVSFTFTTPMTRNNAGFETSGQAGQKTNGLSLDHGMKRVLLDSDSATSPVGFNMIGGDALGILLEQKLRELTYGIETLGHNSFKGSSPSSIASNSIEVVPSLSSVNITPRLQQKDQDVLFTDDLCTRQHSDISHTGLPEITSKHESWVIDGVEECRINQMESQSLNCRHPSPISVLEPSFSTESCESLVSTDGTTNSTGERKFLAQGWNSSRKFYHAELLDSASSTSAGTIVKKCASIFSIMKFATSTTWELDYVKEILCNVELMFMDFTLDRAREIVNPHLFNQLESRKELFESDGGESRMSRKVIFDCVSECLDLRCRRYVGGGYKMWSKGVRMVRKNELLAEEVYKEISGWRGMGDSMVDELVDKDISSQYGRWLDFDVDAFELGAEVEDRIFNSLINEVVSQILQP	927

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g1655	927	PANTHER	PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED	4	922	-	-
	Glsi02g1655	927	Pfam	DUF761-associated sequence motif	79	109	IPR032795	-
	Glsi02g1655	927	MobiDBLite	consensus disorder prediction	391	442	-	-
	Glsi02g1655	927	MobiDBLite	consensus disorder prediction	391	450	-	-
	Glsi02g1655	927	Pfam	Domain of unknown function (DUF4378)	768	919	IPR025486	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g1655	Glsi-ChrGlsi02	42671787	42675932	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g1655	13	925	TRM (TON1 Recruiting Motif) Superfamily	AT3G58650	31.596	4.13e-90	303