Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1651 ATGAAGTTCACTTGGAAATCAATCTTTCCCAGTTGTTATAAGGGAGAATATCCCTCTCCCAGGCCCAAGAAAGTGGTGGCTACAAAGCAAAGCTCGTTTCACAGGATCTCTGTGTCAGATTTGAGTAATCCTAGCTCCACGCTGTCGGAGGATCTCTCCATATCACTTGCAGGATCTAACTTACATGTTTTCACACTTGCTGAGCTAAAGCTCATCACACAGAGCTTCTCTTCGAGTAACTTCCTCGGAGAAGGTGGGTTCGGACCTGTGCACAAGGGTTTCATTGATGACAAGCTCAGGTCTGATCTCAAGGCTCAGACGGTGGCTGTTAAGCTTTTGAACTTGGATGGCTCACAGGGTCACAAAGAGTGGTTGACTGAAGTTGTTTTTCTGGGGCAACTAAGGCATTCACATCTTGTGAAGTTGATAGGATATTGCTGTGAAGAAGAACACAGGCTTTTGGTATATGAATATTTACCAAGAGGAAGCTTAGAAAATCAACTTTTTAGAAGATACTCGGTATCATTACCATGGTCAACGAGAATGAAAATTGCCGTTGGAGCTGCAAAGGGTCTAGCTTTTCTTCACGAGGCAGAGAAACCGGTCATATATAGAGATTTCAAAGCTTCAAACATCTTATTAGACTCTGATTACAATGCAAAGCTATCAGATTTTGGGTTGGCAAAAGATGGACCTGAAGGAGATGACACCCACGTTTCAACCCGAGTCATGGGAACACAAGGCTATGCTGCCCCAGAATATGTCATGACGGGTCACTTGACAGCTAAGAGTGATGTGTATAGTTTCGGTGTTGTGCTGTTGGAGCTGCTAACAGGAAGGAGATCAGTGGACAAAGGACGCCCTCAAAGAGAACAGAACCTAGCAGAATGGGCAAGGCCAATGTTGAATGATCCCAGGAAACTTGGGAGGATCATGGACCCAAGACTTGAAGGCCAATATTCTGAGATGGGGGCAAGAAAAGCAGCTGCTTTGGCTTATCAATGCCTCAGCCACAGGCCAAGGAACAGACCTTCAATGACCGCAGTGGTTAAGGCTCTAGAGCCACTCCAGGACTTCGATGACATTCCGATCGCACCCTTTGTTTACACAGTCCCAACTGATAATGAAGTGCAGCAGAAAGATTCAAAGGAATGTGAAACACTTAGAGAAAGAAAGAACGAAAATGGTCATCGGAATCACGACCTCAACAATGGCCACAAGCATCCTCTAAGATCGCCCAAGTCACAAAAGTCAACAAATTTACAGTCACAGGCTGGCAGAAGAAGTGGGTCAAACTCACCTCCTTGA 1308 0.4526 MKFTWKSIFPSCYKGEYPSPRPKKVVATKQSSFHRISVSDLSNPSSTLSEDLSISLAGSNLHVFTLAELKLITQSFSSSNFLGEGGFGPVHKGFIDDKLRSDLKAQTVAVKLLNLDGSQGHKEWLTEVVFLGQLRHSHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRYSVSLPWSTRMKIAVGAAKGLAFLHEAEKPVIYRDFKASNILLDSDYNAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYVMTGHLTAKSDVYSFGVVLLELLTGRRSVDKGRPQREQNLAEWARPMLNDPRKLGRIMDPRLEGQYSEMGARKAAALAYQCLSHRPRNRPSMTAVVKALEPLQDFDDIPIAPFVYTVPTDNEVQQKDSKECETLRERKNENGHRNHDLNNGHKHPLRSPKSQKSTNLQSQAGRRSGSNSPP 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1651 435 ProSiteProfiles Protein kinase domain profile. 76 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1651 435 FunFam Probable serine/threonine-protein kinase PBL8 159 369 - -
Glsi02g1651 435 MobiDBLite consensus disorder prediction 373 435 - -
Glsi02g1651 435 Gene3D Phosphorylase Kinase; domain 1 36 158 - -
Glsi02g1651 435 FunFam Serine/threonine-protein kinase BIK1 43 158 - -
Glsi02g1651 435 MobiDBLite consensus disorder prediction 377 408 - -
Glsi02g1651 435 SUPERFAMILY Protein kinase-like (PK-like) 51 354 IPR011009 -
Glsi02g1651 435 PANTHER OS01G0588500 PROTEIN-RELATED 47 357 - -
Glsi02g1651 435 CDD STKc_IRAK 82 356 - -
Glsi02g1651 435 Pfam Protein tyrosine and serine/threonine kinase 80 353 IPR001245 GO:0004672|GO:0006468
Glsi02g1651 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Glsi02g1651 435 Gene3D Transferase(Phosphotransferase) domain 1 159 363 - -
Glsi02g1651 435 MobiDBLite consensus disorder prediction 414 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1651 Glsi-ChrGlsi02 40326472 40328347 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1651 62 391 Glycoside Hydrolase AT3G07070 50.448 1.13e-102 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Glsi02g1651 PK_Tyr_Ser-Thr 1.4e-46 CL0016