Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1649 ATGCTTACATGCATAGCTCGTCCCAAGAAACTCGGGAATGACTCGCTGAGTCAGCCCGAAGATTCCGATTCCAAAAACGAAGCCATCAAATCCCTTACTTCTCAGTTCAAGGATATGGCATTGAAGGCATCGGGAGCGTATAAGCATTGCAGCCCCTGCACAGGGCCACCCACGAAGACCCGACTCAGGAGCCATGCTGAATCAGACGCGGACTCTGATCGGTTCCGATGGTCGTACCGAAGAACGGGGAGCTCAAGCTCGACCACAACGAGGACATGGGGGAAGGAGATGGAAGCGAGACTGAAGGGGATTTCGAGTGGAGAAGGGACGCCTAACTCCGCCAGTGGACGCCGGGTGGAGCCGGTGGTCTTGTTCGTGGAGGAGAACGAACCTCAAGAGTGGGTGGCGCAGGTCGAGCCCGGCGTTCTTATCACCTTTGTTTCGCTTCTGCGTGGCGGGAACGATCTGAAGCGGATACGGTTCAGTCGCGAGATTTTTAACAAGTGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAAGGTCATGGAACTTTACAATGTTCAAAGGTTTAACCGCCAGGCTTTCCCTCTTCCAACGCCACCAATATCTGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGACAGCCCTGTCACACCTCCACTAACCAGAGAACGGTTACCTCGTAATTTGTACCGTCCTACTGGGATGGGAACGGGATACTCATCGTCTGATTCCTTTGATCATCAATCAATGCAATCCCGACATCACTATGACTCTGGTGGTTTGAACACAACCCCTAAAGTCTCCACCATTAGCGCTGCCAAGACAGAATTATCATCGATGGATGCGTCTATCAGAAGTAGCTCATCGAGAGAGGCTGATCGCTCAGGGGATCTATCAATCAGCAATGCTAGTGACCTCGAGACTGAATGGGTTGAACAGGATGAACCTGGGGTTTACATCACGATCAGAGCTTTGCCAGGTGGCAAAAGGGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAAATTTGGAGAGATGCATGCCAGATTATGGTGGGAAGAGAACCGCGCCAGAATACATGAACAATACTTGTAA 1101 0.5095 MLTCIARPKKLGNDSLSQPEDSDSKNEAIKSLTSQFKDMALKASGAYKHCSPCTGPPTKTRLRSHAESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPQEWVAQVEPGVLITFVSLLRGGNDLKRIRFSREIFNKWQAQRWWAENYDKVMELYNVQRFNRQAFPLPTPPISEDESSKLESAEDSPVTPPLTRERLPRNLYRPTGMGTGYSSSDSFDHQSMQSRHHYDSGGLNTTPKVSTISAAKTELSSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSREKFGEMHARLWWEENRARIHEQYL 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1649 366 MobiDBLite consensus disorder prediction 1 27 - -
Glsi02g1649 366 MobiDBLite consensus disorder prediction 257 289 - -
Glsi02g1649 366 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 366 IPR044532 -
Glsi02g1649 366 Pfam Transcription factor regulating root and shoot growth via Pin3 132 186 IPR013591 -
Glsi02g1649 366 Pfam Transcription factor regulating root and shoot growth via Pin3 310 365 IPR013591 -
Glsi02g1649 366 ProSiteProfiles BRX domain profile. 132 187 IPR013591 -
Glsi02g1649 366 ProSiteProfiles BRX domain profile. 311 366 IPR013591 -
Glsi02g1649 366 MobiDBLite consensus disorder prediction 197 303 - -
Glsi02g1649 366 Pfam Transcription factor BRX N-terminal domain 27 53 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1649 Glsi-ChrGlsi02 38898389 38903470 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1649 1 366 Major Intrinsic Protein MIP AT1G31880 44.156 2.85e-91 276