Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1613 ATGTCAACGACTGCCTTCGGTAACACACCATTTCTCGTCCAGAATGATGAAAACTGTCATCATTTGTTGCTTATTGAGACAAAGGAGGCGGGAAGGAGGAGGAAGATGGCAATGACCAGCCAAACGGTCAAGGTCAAGAAGACGAAGCTCACGTCATGCTTGACATGTCCTTTATGTGATAGATTCTTCAAAGACGCCACCACAATATCAGAATGCTTGCATACCTCCTTATTATCTCGTCATTTAAGTTTTAATTTCGAATATCTTGGTCGACTTCATTGGAACTTTATCCGGCGTAAAGCATTGCATGCAATTTGCAGGGAATGCATATATAAGAAGCTAACGGATGAGTATTTAAAGCACTGTCCAGTATGCAATGTAGACCTGGGTTGTGGTCCGCAGGACAAACTAAGGGCAGATCATAATCTGCAAGATTTGAGGGAGAAACTTTTCCCTCATGAAGAGCAAATTGCTAAGGAGACAGACAATGTGCCATCAATTCCATTGCCAACCAAAAGAAAGGAGAGATCTCTCTCTTCATTAGGGGGCAATTCAGCTAAACAATCAAGTCATTCTAGTATATTTGCAAGAAGAGCGAAAGCCGCTGCAAGAAAGCTTTTTGCTGGAAAAGAATCTGCTTGTTCTACTGTTCAACCTGATAAAAAGTCAGATGGTGAGAAAGAAGAAAGACACAGCAAGATAGAAAATTTTGATGGTATTCCTAGAAATTTATCTGCAAGAAGAGCAAAAGCTGCAGCAAGAAAAAATTTCATCCCGAAAGAATACATTCCCTCTTCTAGTCAACCTGATAATTTAGCAGGAGATTATAAGAAATACCAAGAGCACTGTGAACTTGAAACTGAAAATGAAATGACTGGAGCTCAGAACTCTTCAGAACCAGATTTGAGCCACCAAAATGAGCCCCATGAAATTTCAGAGAACAATGCTGAGTTATGGAAAGGAAAGACTGGTATCTGGGAGCCCTTAAACTACCTGATGGAAGCTGCACGCAATACAAATTCTACTAAGCCTACAATGCAAGAAAATGCTGTCATGCTGATGCCTGTTAATTCTTGTGACAATGGCTCTGATGCGCCTTTGGCTGAAGTTAACAAACATCACAAAATAAAAGCATATGGTGCTGAAAATGAGTCAACTCCTTCACAACCAGATCCCATCAAAACTAGAAGGTTGCGCAGCAGCCAACAAAGAAGAGTCAAATTCTCTCAGGATTTAAATGTTCCAGCACAAGCTGTGATTGGTTCAAACAGTGAAAGAAATGAAAGATGCAACCCAATATGGGAAATAGATGCACAATTGCCACAGATATCTTCTTGCTACCTAAGAGTCAAGGATGGTAACTTACCTGTTTCATTTATCAAAAGGTATCTCATGAAGAAGCTTCATCTTGCAAGCGATGCAGAGGTGGAGATCACATTACGAGGTCAGCCAGTTTTATCCTCATGGCAACTGCAGAATTTAGTCGACTTATGGTTGCAGGCAGTGCCCCCGTCTGAGAAAATACAGTCGTCTGTTGGCAGCTCAGCAAAAGATTATGTGATGGTTCTTTCATACGGTCGAAAGGCTCAGTCCTCATAA 1599 0.4115 MSTTAFGNTPFLVQNDENCHHLLLIETKEAGRRRKMAMTSQTVKVKKTKLTSCLTCPLCDRFFKDATTISECLHTSLLSRHLSFNFEYLGRLHWNFIRRKALHAICRECIYKKLTDEYLKHCPVCNVDLGCGPQDKLRADHNLQDLREKLFPHEEQIAKETDNVPSIPLPTKRKERSLSSLGGNSAKQSSHSSIFARRAKAAARKLFAGKESACSTVQPDKKSDGEKEERHSKIENFDGIPRNLSARRAKAAARKNFIPKEYIPSSSQPDNLAGDYKKYQEHCELETENEMTGAQNSSEPDLSHQNEPHEISENNAELWKGKTGIWEPLNYLMEAARNTNSTKPTMQENAVMLMPVNSCDNGSDAPLAEVNKHHKIKAYGAENESTPSQPDPIKTRRLRSSQQRRVKFSQDLNVPAQAVIGSNSERNERCNPIWEIDAQLPQISSCYLRVKDGNLPVSFIKRYLMKKLHLASDAEVEITLRGQPVLSSWQLQNLVDLWLQAVPPSEKIQSSVGSSAKDYVMVLSYGRKAQSS 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1613 532 MobiDBLite consensus disorder prediction 177 194 - -
Glsi02g1613 532 MobiDBLite consensus disorder prediction 161 194 - -
Glsi02g1613 532 MobiDBLite consensus disorder prediction 286 307 - -
Glsi02g1613 532 MobiDBLite consensus disorder prediction 210 236 - -
Glsi02g1613 532 PANTHER E3 UBIQUITIN PROTEIN LIGASE DRIP1 38 530 IPR044807 GO:0004842
Glsi02g1613 532 MobiDBLite consensus disorder prediction 220 236 - -
Glsi02g1613 532 MobiDBLite consensus disorder prediction 377 396 - -
Glsi02g1613 532 MobiDBLite consensus disorder prediction 382 396 - -
Glsi02g1613 532 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 39 167 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1613 Glsi-ChrGlsi02 30253868 30259327 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1613 42 451 C3H Transcription Factor Family AT2G30580 30.496 6.09e-42 151