Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1596 ATGTTTATTCTCGTCCCTGTCTTGAGCAAAGCGTCAGCCGTAGAAAAATTCCTCTACACTACATATGGCCTATGGCAAGGACCCCGCATTCTGAAGTCGCTGTCTCTGGTCTTTGTGTTTCTTGTTCAGAATCTACTGGAGAAAAGCATGCCTAGTCCTGAAGGAAAACTTAAAATAAGTTTTGGCTATCAATGCAATGGTAATAGAATTACCTCTTCTGGCATCACCAATAGCTATGAAAGCCTGCCTGCAGTACGTAGAACAGGCAGTTTCTCTTGCTTGTCTGGTGCAGCCTTAAGTGCCAATGCTACGTTAGCAAACACAAACATCTGCGATGGTGTGATAGGAGAAGAAATCCTTCCCAGTTGGGACTCCCCTCATACATTTCGTAAGGTACCCTCTTCGTCAAGCTTTTCAAGGTTGGACATATTGTCATCTTCTTTCCAGAGTAGCTTGTCAAATCTAAGTTGCAGTCCATCCACTCCAAGTGATATGCTTGAATATGAGTCTTGCACATTAAAATCCATGGGTGGTTCTTTGAGAAGTGAAAGTTTTCTTAATGCTATAGAATTACAAGTAGCAGGAGGAGCTGCTGGTGAAGATAGAGTTCAAGCAGTTTGTTCTGAAGAGAATGGTTGGCTCCTTTGTGCTATTTATGATGGCTTTAATGGGAGAGATGCAGCTGACTTTCTGGCTGGTACCCTGTTCGACACCATTTCTTCTTATTTTAATATGCTATATTCGGAAGTGGAGCCAAATTCCATCAGAGCTTCTAATAATATGGGTCTGGATGGATCCTTCCAGTATGAGTTGAGTGAAAGTCTTAATCATCATGACAAACAATCTGTATTGAATTGGGGGATTAAGAGTAGTCCATCTGCTGAGGTAGAACCACAGTGTAAATCATTTTCACATGGCGTACTTGATAGCCTCCAATGTGCTCTTAGTCAGGTTGAGAACGATTTCTTGTACATGGTTGAACAGGAAATGGAGGAACGTCCAGATTTGGTTTCGATTGGATCTTGTGTTTTACTTGTGCTTCTTCATGGGAACAAATTGTATACACTTAATCTAGGTGACAGCAGAGCAGTATTGGCAACATGCGGCAGTAAATTGAATGGGAATGAGAAACTCAATGCTATCCAGCTTACAGATAGTCATACTGTTGATAATGAAGCTGAAAGAGCTCGACTTCTGGTTGATCATCCTGATGATCCTATGACCATAATTGCAGGAAAAGTGAAAGGAAAACTGAAGGTTACTCGGGCTTTTGGAGTTGGTTACTTGAAAAAGAAAAGTCTGAATGATGCGTTGATGGGAATCCTTCGAGTTCGTGATCTTACGAGCCCTCCCTATATTTCTACTCAACCATCATTGAGTGTCCGTGAGATCTCAACTTATGATCGTTTTGTCATAGTTGCGAGTGATGGTTTATTTGACTTCTTCAGTAATGATGAGGCAGTAAAGCTTGTAGAGTCTTATATCTGGAGCAATCCTTTTGGTGATCCAGCAAAGTTTCTCATTGAGCAGCTTGTAGTAAGAGCAGCTGAATCTGCAGGTTTGAGCATGGAAGAGTTGATGAGCATTCCAGCAGGGAGGAGGAGGAAGTACCATGATGATGTAACCGTAATTGTCATTATTCTTGGGATGAATCAGCGGACTTCAAAGGCATCAACTTGCATCTAA 1686 0.417 MFILVPVLSKASAVEKFLYTTYGLWQGPRILKSLSLVFVFLVQNLLEKSMPSPEGKLKISFGYQCNGNRITSSGITNSYESLPAVRRTGSFSCLSGAALSANATLANTNICDGVIGEEILPSWDSPHTFRKVPSSSSFSRLDILSSSFQSSLSNLSCSPSTPSDMLEYESCTLKSMGGSLRSESFLNAIELQVAGGAAGEDRVQAVCSEENGWLLCAIYDGFNGRDAADFLAGTLFDTISSYFNMLYSEVEPNSIRASNNMGLDGSFQYELSESLNHHDKQSVLNWGIKSSPSAEVEPQCKSFSHGVLDSLQCALSQVENDFLYMVEQEMEERPDLVSIGSCVLLVLLHGNKLYTLNLGDSRAVLATCGSKLNGNEKLNAIQLTDSHTVDNEAERARLLVDHPDDPMTIIAGKVKGKLKVTRAFGVGYLKKKSLNDALMGILRVRDLTSPPYISTQPSLSVREISTYDRFVIVASDGLFDFFSNDEAVKLVESYIWSNPFGDPAKFLIEQLVVRAAESAGLSMEELMSIPAGRRRKYHDDVTVIVIILGMNQRTSKASTCI 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1596 561 PANTHER PROTEIN PHOSPHATASE 2C 184 546 IPR015655 GO:0004722|GO:0006470
Glsi02g1596 561 ProSiteProfiles PPM-type phosphatase domain profile. 185 548 IPR001932 -
Glsi02g1596 561 SMART PP2C_4 183 546 IPR001932 -
Glsi02g1596 561 Pfam Protein phosphatase 2C 304 499 IPR001932 -
Glsi02g1596 561 Gene3D - 166 557 IPR036457 -
Glsi02g1596 561 SUPERFAMILY PP2C-like 199 549 IPR036457 -
Glsi02g1596 561 CDD PP2Cc 198 548 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1596 Glsi-ChrGlsi02 22757833 22765165 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1596 53 561 PP2C-type Phosphatase Gene Family AT3G16560 59.806 0.0 562