Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1587 ATGTCTACACCAGTTGTTTCTCCTCCATCAACTCCTTCCAGAATCTTCAATTGGAAAAAGGGTGGAGCGCCAGTTGCCACACCTTTGTATAAAACACCAAAGCCACTACCAGCTGTAATACGTTCCCCTGCTCAAGCCCCTGCCACACATAAAGCTGTTTGGCACTTTCACCGTGCTCCTAAGCCATTGGTTACATCTCATTCTTTCAATAAAGAATTTCACTCTCCTGCATCGTCACCTTCAACTTCATTATATAAGCATCATCATAAAAGGAGCATAATCACCAGTCCTGCTCCTGCATCATCATATCTAGTCTCTCCTCCCACTTCAATACACCAAGGACAAGCAATTCCTCCCTCATTACTTCCAACAAGTGGACGAAGACATTATGCTCCACCACCAGTGAACTCAGTTTCCCCGTTCTCTTTCCCTCTTCTGCCTCCAATGAGCCAAGTTTCACATGCTCCATCTCCTGCATCCAAATTTGGCCCTCATCCTACCAAAATACCACTTCTTCCTCCGAAAATATCTCCTTATGCGTCTTCTTCCAGGAGCCCCATGTCACCTGTCTTGCCTCAAGTTCAAGCATTGCCACCTCCACCTCCTAATGAAGATTGTTTATCAACTGTTTGCACAGAGCCCTATACAAATTCTCCACCCGGAGCACCTTGCAGATGTGTCTGGCCCATGCAAATTGGTCTTCGTCTTAGTGTATCTCTATATACCTTCTTCCCTTTGGTTTCAGAGCTGGCTTCTGAAATTGCTGCTGGGGTTTTCATGAAGCAAAGTCAAGTTCGCATAATGGGAGCTAAATCAGCAAACCAGCAACCAGAGAAAACTGATGTCCTTATAGATCTGGTGCCACTTGGGGAAAAGTTTGATCACACTACAGCATTTTTGAAGTCTGAGAGATTTTGGCATAAACAGGTTATTATAAAAGCTTCCTACTTTGGGGACTATGAAGTGTTATATGTGACCTATCCAGGTTTACCGCCATCTCCTCCTTTACCACCATCAAGCATTACAATGATAGATGGTGGCCCATATTCCAATGATGGCAATAATGGAAGGACAATAAAACCCCTTGGGGTTGACATACAGAAGAGGCAGCATAAACGTGGACTTAGCAGTGGCATAATTGCCATTATTTGTCTTTCAGTTTTTGTAGCTGTTGTTTTATGCTCTGCTGCTGCTTGGGTCTTGTTATTCAAGCGCAGAGATCATGTATCTCAGACACCATGGACTCCACGGGTTTTGCCATCTTCCCTTACCAAAGCATCAGGCACTGTTGTGTCATTAACTGGAGGTGGGCCCGGTTCTGCTGCTTCATCATTTCGATCTAGCATTGCAGCTTATACAGGAGTTGACAGGGAGACCAGTCCAATTGATTGGGGTGCCCGGATGAAGATAGCTCTTGGTGCTGCTCGTGGTCTGGCTTATCTGCATGAAGATTCAAGCCCTCGTGTCATACATAGAGACTTCAAGTCTAGCAACATCTTATTGGAAGATGATTTTATACCAAAAGTATCTGATTTTGGATTGGCTCGAACAGCAACAGATGAGGAAAACAGACACATATCAACACGGGTAATGGGAACTTTTGGTTATGTGGCTCCAGAGTATGCAATGACTGGGCATCTTCTTGTAAAGAGTGATGTTTATAGTTATGGCGTTGTTCTTCTTGAGCTTTTGACTGGAAGAAAACCAGTAGACATGTCACAACCTCCTGGTCAAGAGAACCTTGTTGCATGGGCCCGTCCTCTCCTGACAAGTAAAGAAGGATTGGAAGCAATAATAGATCCATCACTAGGATTTGATGTACCTTTTGATAGTGTAGCTAAAGTTGCAGCCATAGCTTCGATGTGTGTGCAACCAGAGGTATCAAACCGTCCTTTTATGGGTGAGGTTGTTCAGGCGTTAAAACTTGTATGTAATGAATGTGATGAAGCAAAGGAAGCAGGTTCAAGAATTTCTAGCCAGGAGGACTTGTCTATTGATCTGGATACAGGAGTTAGTACTGTTTCTGGACAACTAAGAGATAATTTCCAATGCCAACACTTAGCTGCCAACTATGATTCTGGAGTAGATATTGAAAGGGAATTATCAGCATCAGAATTGTTCAGTTCATCGGGAAGATTTGGAAGGCAGGCATCTGGATCATTTAGAAGACACAATTATTCAGGTCCTTTGAGAACTGGAAGAAGTAGACGACTGTGCCAGATAATTCGAAGGCTTTCTGGTGGTAGTGTCAGTGAACATGGAATTATGTTCAAGTCCTGA 2280 0.4368 MSTPVVSPPSTPSRIFNWKKGGAPVATPLYKTPKPLPAVIRSPAQAPATHKAVWHFHRAPKPLVTSHSFNKEFHSPASSPSTSLYKHHHKRSIITSPAPASSYLVSPPTSIHQGQAIPPSLLPTSGRRHYAPPPVNSVSPFSFPLLPPMSQVSHAPSPASKFGPHPTKIPLLPPKISPYASSSRSPMSPVLPQVQALPPPPPNEDCLSTVCTEPYTNSPPGAPCRCVWPMQIGLRLSVSLYTFFPLVSELASEIAAGVFMKQSQVRIMGAKSANQQPEKTDVLIDLVPLGEKFDHTTAFLKSERFWHKQVIIKASYFGDYEVLYVTYPGLPPSPPLPPSSITMIDGGPYSNDGNNGRTIKPLGVDIQKRQHKRGLSSGIIAIICLSVFVAVVLCSAAAWVLLFKRRDHVSQTPWTPRVLPSSLTKASGTVVSLTGGGPGSAASSFRSSIAAYTGVDRETSPIDWGARMKIALGAARGLAYLHEDSSPRVIHRDFKSSNILLEDDFIPKVSDFGLARTATDEENRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPPGQENLVAWARPLLTSKEGLEAIIDPSLGFDVPFDSVAKVAAIASMCVQPEVSNRPFMGEVVQALKLVCNECDEAKEAGSRISSQEDLSIDLDTGVSTVSGQLRDNFQCQHLAANYDSGVDIERELSASELFSSSGRFGRQASGSFRRHNYSGPLRTGRSRRLCQIIRRLSGGSVSEHGIMFKS 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1587 759 ProSitePatterns Serine/Threonine protein kinases active-site signature. 489 501 IPR008271 GO:0004672|GO:0006468
Glsi02g1587 759 PANTHER OS01G0750732 PROTEIN 458 668 - -
Glsi02g1587 759 Gene3D Transferase(Phosphotransferase) domain 1 449 664 - -
Glsi02g1587 759 SUPERFAMILY Protein kinase-like (PK-like) 460 640 IPR011009 -
Glsi02g1587 759 ProSiteProfiles Protein kinase domain profile. 344 643 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1587 759 FunFam Receptor-like serine/threonine-protein kinase ALE2 446 660 - -
Glsi02g1587 759 Pfam Protein tyrosine and serine/threonine kinase 459 640 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1587 Glsi-ChrGlsi02 21270263 21276078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1587 454 759 Receptor kinase-like Gene Family AT5G56890 70.323 2.09e-134 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Glsi02g1587 PK_Tyr_Ser-Thr 2.3e-25 CL0016