Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1581 ATGATGCATATGTGGGGGCATGGATCTCAATACAGAAAAGGACCAGATTCTCTAAGAGGAACACAACCGATAGCCATGCTTAGGCTTCCATGCTTTTGTTGTGCACTAGGTTGCAAGCACAACATTGACCACCCAAGAGCAAGGCCTCTCAAGGATTTTAGAACCCTTCAAACACATTATAAGAGGAAGCATGGGATCAAACCCTACATGTGCAGAAAATGTGGCAAAGCATTTGCAGTGAAAGGTGATTGGAGAACTCATGAGAACTCATGGAACAACTTGTATAGCATCTTAAAAGAAAATTCAATTGATTCCACAATTTCTATCAGATCGGGTACTTAG 342 0.4152 MMHMWGHGSQYRKGPDSLRGTQPIAMLRLPCFCCALGCKHNIDHPRARPLKDFRTLQTHYKRKHGIKPYMCRKCGKAFAVKGDWRTHENSWNNLYSILKENSIDSTISIRSGT 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1581 113 PANTHER ZINC FINGER PROTEIN WIP2 2 90 IPR043584 GO:0003700|GO:0010468
Glsi02g1581 113 ProSiteProfiles Zinc finger C2H2 type domain profile. 69 100 IPR013087 -
Glsi02g1581 113 SUPERFAMILY beta-beta-alpha zinc fingers 55 90 IPR036236 -
Glsi02g1581 113 Gene3D Classic Zinc Finger 54 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1581 Glsi-ChrGlsi02 20150708 20151191 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1581 2 95 C2H2 Transcription Factor Family AT3G57670 82.979 2.59e-56 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Glsi02g1581 None None None