Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1555 ATGGCAGTAGATCTGATAGGCCTTCCCAGGATGGAAGAGCAGATGGCTATACAAGAAGCTGCTTCTGCTGGGTTGAAGAGTATGGAACATCTAATCCGTGTGCTTTCATCTCAATCCCCTTCTGATTCTCATCATCTCCAACCACTTGACTGCGCTCAAATCACCGACTTCACTGTTTCAAAGTTCAAGCAAGTCATTAATTTACTGAATCGAACCGGTCATGCCCGCTTTCGTCGTGCACCTTCCAATCCTTCTCCTTCTTCTTCTCCTCCTCCTAATTCATCCCAATCTCACAAATTAAACCAGTTCGGTCTTAACCCAGCTCAATCCTCCCAGTCCTCTCAGGGTTTGACCCTTGATTTTGCAAAGCCCAGCCTGGTCAAGACGGGTTCTCTTAACCCTTCTACTGAGTTATCCGTTTCTCATTATTCCAAGGACAGCTTTAGTATATCCCCTCCCATGTCTGCCACCACCTCGTCGTTTATGTCCTCCATCACCGGAGACGGCAGCGTTTCCGATGGGAAAATAGGGCCATCTCTGCTAGCCCATCCCGCACCAACTGTCTCTGCCGGTAAGCCCCCTCTGTCGTCATCTCACCGGAAAAGGTGCCACGATGCTGCCCTCTTCGAGAAAATTTCATCCTCCAGTCACTGCCATTGCTCTAAGAGAAGGAAATCACGAGTAAAGAAGACGATCCGAGTGCCGGCGATAAGCTCGAAGATCGCTGATATTCCGCCGGACGAGTGTTCTTGGAGAAAGTACGGTCAAAAGCCGATCAAGGGCTCACCCTTCCCACGTGGGTACTACAAGTGCAGTACAGTGAGAGGATGCCCAGCGAGGAAGCACGTGGAGCGAGCCCAAGACGATCCAAAGATGCTGATCGTGACGTACGAGGGGGAGCACCGTCATCCGGAAGCACGGGCGGCGGAGTCCGGTGGAGCAGGCACAAATCTCAGCCTTAAGTCCAGTTAA 972 0.5134 MAVDLIGLPRMEEQMAIQEAASAGLKSMEHLIRVLSSQSPSDSHHLQPLDCAQITDFTVSKFKQVINLLNRTGHARFRRAPSNPSPSSSPPPNSSQSHKLNQFGLNPAQSSQSSQGLTLDFAKPSLVKTGSLNPSTELSVSHYSKDSFSISPPMSATTSSFMSSITGDGSVSDGKIGPSLLAHPAPTVSAGKPPLSSSHRKRCHDAALFEKISSSSHCHCSKRRKSRVKKTIRVPAISSKIADIPPDECSWRKYGQKPIKGSPFPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHPEARAAESGGAGTNLSLKSS 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1555 323 MobiDBLite consensus disorder prediction 92 116 - -
Glsi02g1555 323 Pfam WRKY DNA -binding domain 247 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g1555 323 FunFam WRKY transcription factor 65 229 306 - -
Glsi02g1555 323 MobiDBLite consensus disorder prediction 301 323 - -
Glsi02g1555 323 SUPERFAMILY WRKY DNA-binding domain 243 304 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g1555 323 ProSiteProfiles WRKY domain profile. 240 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi02g1555 323 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 14 309 IPR044810 GO:0003700
Glsi02g1555 323 Gene3D WRKY domain 231 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi02g1555 323 MobiDBLite consensus disorder prediction 73 116 - -
Glsi02g1555 323 Pfam Plant zinc cluster domain 200 243 IPR018872 -
Glsi02g1555 323 SMART WRKY_cls 245 305 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1555 Glsi-ChrGlsi02 17283855 17285088 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1555 1 310 WRKY Transcription Factor Family AT2G24570 54.599 7.94e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi02g1555 WRKY 1.2e-25 CL0274