Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1531 ATGTCTTCGTGTTTAAGTGGAGCTAGTGGAAGAACCTACGGGTTCGATTTCGATTTTGTCAAATCTCCATCTACATCGACCCGAACTTCACACACGTCTTCTCCTGCCTCAACTATTTCCGAGTCGAGCGATTCTCCGCTTCTAATCTCCACCCGAAAACCTCGAACCCCTCGAAAGCGACCGAACCAAACTTACAATGAAGCTGCCGCAATGCTTTCGACAGCATACCCAGATCTCTTCTCCACTAAAAACCTCAAAAAACCCGGCAAATTCACCAAACCAACCGATACCTTTTCGGATGATTCTTCAGAATTGCTATTGCCTTTCCGAGTCTTTGATAGCTCCTGTTTCTTACTCCACCAACCCATCCAACACAAGTCCAGTTTTCTAATGGAGCCCAAAGTGGTTAATCTTCAAGAAAAACCATGCCAAAGTCCGGGAGAGATTAGCTCGCGAGTGAATACGCTGGAATTGGACGATGGTTGCCAAGAAGATTTCGATGCCGAATCGATTCTCGATGAGGAAATCGAAGAGGGAATTGATAGCATCATGGGGAGTAGAGCTGAAGATTCCAATGGCGCGTCTTGTCACAGCGACCAAGTGATGAATCCTTGGAGTGGGAATTCGTCGGGGTTTGGTTTTGGCGGGAAATTTGATTTCCGACTGGGGTTGAGAAGTGCAGGGGTTAGAGCTCTCCGGCATGTTGATGAAGGGAATTGGTGGAATTTTCCTATTGTTGATATGCTCCAAATCTCACCGAAAATCGAAAAGCCGCCTCCGTCAGTTTCCGCTGAGAGAAAAAAGAAGAATAGGAAGAAGAAGGTCGATAAACCAGCCATGGCATTGAGGAACTCGGAGTTGCCGAAAGAGAATTCAATTCCGAAATCAAAACCAGGTTTGCTGTTGAAATTGAATTACAACGAGGTTTTAAACGCCTGGTCTGACCGGGGTTCACCTTTCGCCGGCGAAAGTCCTGGCTCCGATGTGCCGGAGAATGACGTCAATGCGCGTCTGGCTCAGATAGATTTATTCTCGGACAACGGAGGAGTGAGAGAAGCTAGTGTGTTGCGCTACAAAGAAAAGCGTCGTACACGGCTCTTCTCTAAGAAGATCAGATACGAGGTCAGAAAAGTCAACGCAGATCGACGGCCCAGAATGAAGGTACGAGGACCGTTGAAGAAAATTGATTTATTATCTTAG 1200 0.4675 MSSCLSGASGRTYGFDFDFVKSPSTSTRTSHTSSPASTISESSDSPLLISTRKPRTPRKRPNQTYNEAAAMLSTAYPDLFSTKNLKKPGKFTKPTDTFSDDSSELLLPFRVFDSSCFLLHQPIQHKSSFLMEPKVVNLQEKPCQSPGEISSRVNTLELDDGCQEDFDAESILDEEIEEGIDSIMGSRAEDSNGASCHSDQVMNPWSGNSSGFGFGGKFDFRLGLRSAGVRALRHVDEGNWWNFPIVDMLQISPKIEKPPPSVSAERKKKNRKKKVDKPAMALRNSELPKENSIPKSKPGLLLKLNYNEVLNAWSDRGSPFAGESPGSDVPENDVNARLAQIDLFSDNGGVREASVLRYKEKRRTRLFSKKIRYEVRKVNADRRPRMKVRGPLKKIDLLS 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1531 399 MobiDBLite consensus disorder prediction 254 294 - -
Glsi02g1531 399 Pfam CCT motif 351 389 IPR010402 GO:0005515
Glsi02g1531 399 MobiDBLite consensus disorder prediction 23 63 - -
Glsi02g1531 399 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 389 - -
Glsi02g1531 399 MobiDBLite consensus disorder prediction 23 50 - -
Glsi02g1531 399 ProSiteProfiles CCT domain profile. 351 393 IPR010402 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1531 Glsi-ChrGlsi02 15290129 15292560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1531 297 399 C2C2-CO-like Transcription Factor Family AT1G73870 45.000 3.57e-18 83.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Glsi02g1531 CCT 1e-13 CL0281