Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1506 ATGGCTGCTCAGGAAAAGAACAAGGGAGTGAAGAAGTTACAGAAGAGCTATTTCGATGTGATGGGTTTGTGCTGCTCCTCAGAGGTGCCTCTGATTGAGAACATCCTGAAACCTCTCGAGGGAATCAAAGAGGTTTCAGTCATCGTACCATCACGAACCGTCATTGTTGTCCACGACGGTCTTGTCATTTCCCAAGTTCAAATTGTTAAGGCTCTAAATCAAGCAAGGTTGGAAGCAAATATCAGAGTGTACGGGGAAGGGAAGCACCAGAAGACATGGCCAAGCCCTTATGCAGTTGCGTCTGGTCTTTTCCTTCTTCTATCCTCCTTAAAGTTTGTGTACCGTCCCTTACAATATCTGGCCCTTGGAGCAGTAGCAGCAGGTGCCTTTCCCATTATTTTAAAAGCCATAGCCTCGATTCGGAACCTTAGGCTTGACGTCAACATTCTCATGATCATAGCAGTTGTTGGGACAATTGCTTTGAATGATTATTTGGAAGCTGGCACCATTGTTTTCCTCTTCTCAATTGCGGAATGGCTAGAGTCAAGAGCAAGCCACAAGGCAAGTGCAGTGATGTCGTCGTTGATGAACATGGCCCCTCAGAAAGCAATCATAGCCGAAACAGGAGAAGTTGTGGACGCTGACGAGGTGAAAGTGAACACGATCCTAGCCGTTAAAGCAGGGGAAGACATACCCATTGATGGAATTGTTGTAGATGGAACCTGTGAAGTCGACGAGAAAACATTGACTGGGGAATCTTTCCCAGTACCCAAACAAAAGGACTCTACTGTATGGGCTGGCACCATCAATATAAATGGTTATATTAGCGTGAAAACCACTGCACTGGCTGAGGATTGTGTGGTGGCTAAAATGGCAAAGCTTGTGGAAGAAGCTCAAAACAGAAAAACCAAGACTCAGAGATTGATAGACAAGTTTGCCAAGTTTTATACCCCAGCTGTTGTGATCATATCAACTCTTTTAGCGGTAATTCCAGTTGTGTTAAGAGTACATAATGCGAAACATTGGTTTCACTTTGCATTGGTTGTTTTAGTAAGTGCATGTCCTTGTGCACTTATACTTTCTACGCCAGTTGCAACTTTCTGTGCTTATACAAAAGCAGCTACATCCGGTCTTCTCATCAAAGGTGGTGATTATCTTGAAACTCTTGCAAAAATTAAGGTCATGGCTTTTGACAAAACAGGCACTATTACAAAGGGTGAATTTGTGGTGACAAATTTCCAACCTCTTTGTGATGACGTTGATTTGAACACATTGCTTTACTGGGTCTCAAGCGTTGAAAGCAAGTCAAGCCATCCACTGGCTGCAGCAGTTGTTGACTATGGAAAGTCACTCTCCATTGAACCTAAGCCAGAGAAGGTGACAGAATTTGAAAATTTTCCTGGAGAGGGTATTCATGGAAAAATTGATGAGAGAGATATTTACATTGGAAATAGGAAAATTGCCACGAGAGCCGGGTCTGAAACAGTTCCTACCGTACAAGGTGACCTTCAGGGAGGAAAGACTACTGGCTACATATACTCTGGAGCAACCTATATTGGATTTTTCTCTCTCTCGGATGTTTGCCGATCTGGGGTTCAGGAGGCAATAGGGCAGCTGAAGTTATTGGGAATCAAAACCTCTATGCTCACCGGAGATAGTCAAGCAGCTGCCATGCAAGCACAAGAGCAGCTAGGGCATGCTTTGAATCAAGTCCATGCAGAACTTTTACCAGAAGGAAAAGTAAAGTTGATCACGGAATTCAAAAAGGAAGGACCAACAGCTATGGTTGGAGATGGTCTAAATGATGCGCCAGCATTAGCTACAGCTGATATCGGTATCTCAATGGGCATTTCAGGTTCTGCACTAGCAAGTGAGACGGGCAATATAATTCTCATGTCAAATGACATTAAGAAGATACCACAAGCCATCAAGCTTGCGAGAAAATCTCATAGGAAAGTAATAGAAAATGTTATACTGTCAGTCCTTACTAAGGCTGCAATTCTTGGCTTAGCCTTTGCTGGTCACCCACTTGTTTGGGCAGCAGTTCTTGCCGATGTTGGAACATGCTTGTTGGTCATCTTAAACAGCATGCTACTTCTGCACAGAGGAGACAAGCATGGTGGAAAATGTTGTCGATCTTCTTCTCAACTACACATCAATAAAAATGGATGTAATGGCAATAATGGAAAGTCTTCCAATCATCATCATCGTGATCAACATCAACATCAGCACCATACTCATCAGCATTGTTGCTCAGACAACACAAACAAGATCTCTCAGCCTCAGAAGTGTGCCTCACAATGTCAGTCTAGCCCTTCAAATGGATGTAATGCCAGTAAGTCTTCTCATCGTCATAATCATCAACAACATCAACATCGGAATCATAGTCATCAACATTGCGGCTCAGACAACACCAGAAAGATCTCTCAGCCTCAGAAATGTGCCTCTGAGACATGTTCCTCAAAATGTCAGTCAAGCCCTTCAAATTCAAGTATTGTTGGAAATCCTAAGCATGCTAAAATCATGGAAAGTCATGACCAATGTGTGGCCAGTGATGAATTCCATGAACCACACTGTCATCATGGAAGATGTGAGAAGAGTAAATATGGTGTCCAGTTACGTGATATGGAAAAGCAGGGTTGTTCAGGCTCTCAACAGATGATTCTGACTGCAGCAGATAAATGTCCAAGTGCAGTAGACAGTCATGTTAGTTGTTTAGAACATATAAATTCCCATAGGAAATTTCATTGCCACAACAGAAATTGTGATAGACTCACTCATGATGGAACATCACTTGGTTCTTCCTGTCATGCCAATCTTTCTGCTCAGAAAGAAAGCCAACAGTTTAGTAGTAATCATTGCCACTTAATCACTGGTTGTGAAAATCCTAAAGATCATGAACTCAGAAAGATGTTAAGATGTGATCATGAAATTGAGCGTCAAAATCCAGGGCCTCATTCTGATTTTAGGAGGTATGGGGAAGATTACATTTCCATTGACATAGACAATAAGCATGCTGAATCAGCCTCAATGCATGCTTGTGAAAGTTTGGAAGAGAAAGAATTAGGATCCTGTTGTGAAGGCTGTCCAATCAAACACGAGGAATTCCCTGTTGTGTGTTCCTGTGTGACTTCAAATAAGAGAGAAGTTGGTGCATGTTGTGAAGGCTCTTCAAAGGAATTCATAGAGTTTCCAATTGCGCATGCTTGTATTAGTTTGGACAAGAGAGAGATTGGTGGATGTTGCAAGAGCTACATGAAGGAATGCTGTGGCAACCATGGACATTTAGGGGCTGGTTTTTGTGGAGGTTTATCCGATATTATTGCAGAACAGGTGTAG 3339 0.4259 MAAQEKNKGVKKLQKSYFDVMGLCCSSEVPLIENILKPLEGIKEVSVIVPSRTVIVVHDGLVISQVQIVKALNQARLEANIRVYGEGKHQKTWPSPYAVASGLFLLLSSLKFVYRPLQYLALGAVAAGAFPIILKAIASIRNLRLDVNILMIIAVVGTIALNDYLEAGTIVFLFSIAEWLESRASHKASAVMSSLMNMAPQKAIIAETGEVVDADEVKVNTILAVKAGEDIPIDGIVVDGTCEVDEKTLTGESFPVPKQKDSTVWAGTININGYISVKTTALAEDCVVAKMAKLVEEAQNRKTKTQRLIDKFAKFYTPAVVIISTLLAVIPVVLRVHNAKHWFHFALVVLVSACPCALILSTPVATFCAYTKAATSGLLIKGGDYLETLAKIKVMAFDKTGTITKGEFVVTNFQPLCDDVDLNTLLYWVSSVESKSSHPLAAAVVDYGKSLSIEPKPEKVTEFENFPGEGIHGKIDERDIYIGNRKIATRAGSETVPTVQGDLQGGKTTGYIYSGATYIGFFSLSDVCRSGVQEAIGQLKLLGIKTSMLTGDSQAAAMQAQEQLGHALNQVHAELLPEGKVKLITEFKKEGPTAMVGDGLNDAPALATADIGISMGISGSALASETGNIILMSNDIKKIPQAIKLARKSHRKVIENVILSVLTKAAILGLAFAGHPLVWAAVLADVGTCLLVILNSMLLLHRGDKHGGKCCRSSSQLHINKNGCNGNNGKSSNHHHRDQHQHQHHTHQHCCSDNTNKISQPQKCASQCQSSPSNGCNASKSSHRHNHQQHQHRNHSHQHCGSDNTRKISQPQKCASETCSSKCQSSPSNSSIVGNPKHAKIMESHDQCVASDEFHEPHCHHGRCEKSKYGVQLRDMEKQGCSGSQQMILTAADKCPSAVDSHVSCLEHINSHRKFHCHNRNCDRLTHDGTSLGSSCHANLSAQKESQQFSSNHCHLITGCENPKDHELRKMLRCDHEIERQNPGPHSDFRRYGEDYISIDIDNKHAESASMHACESLEEKELGSCCEGCPIKHEEFPVVCSCVTSNKREVGACCEGSSKEFIEFPIAHACISLDKREIGGCCKSYMKECCGNHGHLGAGFCGGLSDIIAEQV 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1506 1112 ProSiteProfiles Heavy-metal-associated domain profile. 14 80 IPR006121 GO:0046872
Glsi02g1506 1112 NCBIfam HAD-IC family P-type ATPase 170 673 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g1506 1112 ProSitePatterns E1-E2 ATPases phosphorylation site. 398 404 IPR018303 -
Glsi02g1506 1112 Gene3D - 184 299 - -
Glsi02g1506 1112 SFLD p-type atpase 379 648 IPR044492 -
Glsi02g1506 1112 SFLD Haloacid Dehalogenase 379 648 - -
Glsi02g1506 1112 PRINTS Copper-transporting ATPase signature 318 332 - -
Glsi02g1506 1112 PRINTS Copper-transporting ATPase signature 574 591 - -
Glsi02g1506 1112 PRINTS Copper-transporting ATPase signature 187 205 - -
Glsi02g1506 1112 PRINTS Copper-transporting ATPase signature 631 645 - -
Glsi02g1506 1112 FunFam Putative cadmium/zinc-transporting ATPase 3 10 83 - -
Glsi02g1506 1112 Pfam E1-E2 ATPase 206 374 - -
Glsi02g1506 1112 Gene3D - 9 83 - -
Glsi02g1506 1112 Gene3D - 407 528 IPR023299 GO:0000166
Glsi02g1506 1112 CDD P-type_ATPase_HM 130 698 - -
Glsi02g1506 1112 Pfam haloacid dehalogenase-like hydrolase 392 610 - -
Glsi02g1506 1112 Gene3D - 387 647 IPR023214 -
Glsi02g1506 1112 SUPERFAMILY HMA, heavy metal-associated domain 12 80 IPR036163 GO:0046872
Glsi02g1506 1112 FunFam Copper-transporting ATPase 1, putative 185 299 - -
Glsi02g1506 1112 SUPERFAMILY Calcium ATPase, transmembrane domain M 147 390 IPR023298 -
Glsi02g1506 1112 MobiDBLite consensus disorder prediction 775 807 - -
Glsi02g1506 1112 SUPERFAMILY Calcium ATPase, transduction domain A 210 295 IPR008250 -
Glsi02g1506 1112 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 10 701 - -
Glsi02g1506 1112 NCBIfam cadmium family heavy metal-translocating P-type ATPase 147 700 - -
Glsi02g1506 1112 FunFam Putative cadmium/zinc-transporting ATPase 3 407 528 - -
Glsi02g1506 1112 PRINTS P-type cation-transporting ATPase superfamily signature 396 410 - -
Glsi02g1506 1112 PRINTS P-type cation-transporting ATPase superfamily signature 596 615 - -
Glsi02g1506 1112 PRINTS P-type cation-transporting ATPase superfamily signature 620 632 - -
Glsi02g1506 1112 PRINTS P-type cation-transporting ATPase superfamily signature 542 552 - -
Glsi02g1506 1112 PRINTS P-type cation-transporting ATPase superfamily signature 245 259 - -
Glsi02g1506 1112 MobiDBLite consensus disorder prediction 722 752 - -
Glsi02g1506 1112 NCBIfam heavy metal translocating P-type ATPase 147 699 IPR027256 GO:0006812|GO:0016020|GO:0019829
Glsi02g1506 1112 SUPERFAMILY HAD-like 395 697 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1506 Glsi-ChrGlsi02 14385369 14396020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1506 11 838 Primary Pumps ATPases AT4G30110 60.855 0.0 1065
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1506 02 14385369 14396020 Glsi02g1506 02 14385369 14396020 ECH