Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1499 ATGCCAGTAACCTTCAAAGGCTCCTACACCGTGAGGCCTTCAGATCCAACATGGATAGGAACAATGCCCTTATCTGAATTGGACCAAACAGGTATCTTAACTCACGTACCCACCATCTACTTCTACCGTCCCCCACAAAACTGGCTTTCACCCGCCACCGCCATTGCTGACACTTTGAAACTCTCGCTAAGCCGAGCCTTGGTGCCGTTTTACCCGCTAGCAGGTCGTTTGGAATGGATAGGAAACGGTCGTCTTCACCTTCAGTGCAATGCAATGGGAGCTCGATTTATTGAAGCCGAGGCTGACTCAAGTCTAGATGACCTCGGTGACCTCACTCCTTCCCCAGAGTACCATCACCTTGTCCCAAAAGTAGACTATACCCTCCCAATTCACGAGCTGCCTTTGGTTCTGGTTCAGCTCACGAGGTTCAAGTGTGGTGGAATCAGCCTCAGTTTGGCACTTTCACATGCAGTGGCGGATGGACAAGCGGCTCATCACTTCATCTCGGAGTGGGCTGTGCTTGCAAGAGGTGAGCCTTTACAAAAAACTCCGTTTCTCGATCGGACCCTGCTGCATGCTGGGGAACCTCCGGCCTCCCCGGCGCCGTGTCTCGATCACCACCTGCTGTTCAGTCCTCCTCCGTTGTTACTGGGTCAGTCTGATACCATAGAGGAAAGAAAGAAGAAAACCAGAGTGGTTATGTTGAGAATGAGCAAAACCCAAGTTGAGAATTTGAGAAAGATGGCTAATGAGACTTGGGATAAGCCCAATTCAGGTCACGGTTATACACGGTACGAGACTATAGCTGGCCATATATGGAGAAGCGCATGCAAGGCAAGAGGGCACAAACAGGAGCAACCAACGGCGTTAGGGGTTTGTGTAGACTCAAGGTTTCGCATGAAGCCTCCATTGCCAAAAGGGTACTTTGGAACTGCAACTTTGGACGTGGTGGCTACAAGTCTTGCTGGAGATTTGATGTCAAAGCCATTAGGGTACGCTTCCAGTAGAATAAGGGAAGCCAAAGAGAAGGCCACGGATGAATATGTGAGGTCGGGGATTGAGCTCTTGAAGAACGAAGAGGACTTGACGAGGTTTCAGGACATTCATGGACTGGTAAGTGCTGACAAAGGGACATTCTATGGTAATCCTAATATTGGTGTGGTTAGTTGGCTGACTTTGCCAGTATGTGGGCTCGATTTTGGGTGGGGAAAGGAGATTTATATGGGGCCAGCTGGGACCCATGACATGGATGGGAGTTCTTTTATTCTTCCTGGTCCTGATGGTGATGGTTCTATAGTGGTTGCTTTGTGCCTGCAAGTGGCTCATATGGATGCGTTTAAGAAGCATTTTTATGAAGACATGGTGTTGTAA 1371 0.4923 MPVTFKGSYTVRPSDPTWIGTMPLSELDQTGILTHVPTIYFYRPPQNWLSPATAIADTLKLSLSRALVPFYPLAGRLEWIGNGRLHLQCNAMGARFIEAEADSSLDDLGDLTPSPEYHHLVPKVDYTLPIHELPLVLVQLTRFKCGGISLSLALSHAVADGQAAHHFISEWAVLARGEPLQKTPFLDRTLLHAGEPPASPAPCLDHHLLFSPPPLLLGQSDTIEERKKKTRVVMLRMSKTQVENLRKMANETWDKPNSGHGYTRYETIAGHIWRSACKARGHKQEQPTALGVCVDSRFRMKPPLPKGYFGTATLDVVATSLAGDLMSKPLGYASSRIREAKEKATDEYVRSGIELLKNEEDLTRFQDIHGLVSADKGTFYGNPNIGVVSWLTLPVCGLDFGWGKEIYMGPAGTHDMDGSSFILPGPDGDGSIVVALCLQVAHMDAFKKHFYEDMVL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1499 456 Gene3D - 1 207 IPR023213 -
Glsi02g1499 456 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 11 450 - -
Glsi02g1499 456 FunFam Tryptamine hydroxycinnamoyl transferase 218 451 - -
Glsi02g1499 456 Gene3D - 219 453 IPR023213 -
Glsi02g1499 456 Pfam Transferase family 1 452 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1499 Glsi-ChrGlsi02 14030944 14032314 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1499 1 452 Monolignol Biosynthesis Gene Families AT5G48930 38.546 3.46e-109 328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1499 02 14030944 14032314 Glsi02g1499 02 14030944 14032314 ECH