Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1470 ATGTATGCGAGCTCGTTCGACGGCTCCGCTGCCTTTTCCGGCGGTGGATTTATGCCTTCTCAGGCTACTCAGGGCCCAGACCCTTCCTTCTATTCCTCCAAGAATCGTGATGCTCAGTCGTTGCTTCCTTTGACGATCAAGCAGATAAATGATGCATTTCAGTCGAGCGATGATAAGTCCAATTTGATTATTGATGGTGTGGATGTTAATAATGTGACTCTTGTAGGAAGGGTGTGCAATAAAGCTGGAAGGGTTACTGATGTTACATTTGTACTTGATGATGGGACTGGAAGGATTGAGTGTAATAAATGGCTTCAGGAAGCAGTAGATACGAATGAAGTGGAGGGTATCTTGGATGGCATGTATGTGCGTCTTCATGGACACTTGAAAGGCTTTCAAGGCAAAAGGACCTTAAGTGTTTTCTCTTTTAGGCCTTTGAACGACTTTAACGAGATTGCAAGCCACTTCATTGATTGTATATATGTGCATCTCTATAATACCAAGTTACGGAATGGTGTCCCTAATCAGCAACATATGACCAATTCCACAACTATTACTCCCACAGAAGGTTATCAAGCTGCCCCACCAAATCAATTCTCTGGTCAATTTAACCATGGTCAGAAGAGTGTTGAAGATATGGTCTTAGATGTTTTGCATCTTCCCACAAACAGGGCAAGGGAAGAGGGAGTCCCTCGTGAACTTATTGCACAGCATCTTGGAATTCCTTTGGATAAGATCATGTTATCTATTAAAAGTCTCATTGAGGAAGGCGCCATTTATGAGGCTATAGCTGATCACTATAAGTCAATTGTCAACGGTTGA 822 0.427 MYASSFDGSAAFSGGGFMPSQATQGPDPSFYSSKNRDAQSLLPLTIKQINDAFQSSDDKSNLIIDGVDVNNVTLVGRVCNKAGRVTDVTFVLDDGTGRIECNKWLQEAVDTNEVEGILDGMYVRLHGHLKGFQGKRTLSVFSFRPLNDFNEIASHFIDCIYVHLYNTKLRNGVPNQQHMTNSTTITPTEGYQAAPPNQFSGQFNHGQKSVEDMVLDVLHLPTNRAREEGVPRELIAQHLGIPLDKIMLSIKSLIEEGAIYEAIADHYKSIVNG 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1470 273 Pfam OB-fold nucleic acid binding domain 72 144 IPR004365 GO:0003676
Glsi02g1470 273 SUPERFAMILY Nucleic acid-binding proteins 41 168 IPR012340 -
Glsi02g1470 273 PIRSF RPA32 1 271 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Glsi02g1470 273 Gene3D - 203 271 IPR036388 -
Glsi02g1470 273 FunFam replication protein A 32 kDa subunit A-like 34 168 - -
Glsi02g1470 273 PANTHER REPLICATION PROTEIN A-RELATED 5 270 IPR040260 -
Glsi02g1470 273 Pfam Replication protein A C terminal 163 265 IPR014892 -
Glsi02g1470 273 SUPERFAMILY "Winged helix" DNA-binding domain 207 270 IPR036390 -
Glsi02g1470 273 CDD RPA2_DBD_D 71 164 - -
Glsi02g1470 273 Gene3D - 33 168 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1470 Glsi-ChrGlsi02 13164336 13168262 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1470 1 221 Core DNA Replication Machinery Family AT3G02920 51.982 2.76e-79 237