Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1445 ATGGAAACCACACATGAATTCATTTTCCGTTCAAAGCTCCCGGACACTTACATCCCAACCCTCCTCCCACTGCACGCTTACTGCTTCGAGAACTTGTCCCAATTCAAAGACCGTCCCTGCCTGATCAACGGCACCACCGGCGAGACCTTCACTTATACCGATGTCGAACTTACCTCCCGCAGAGTTGCCTCCGGTCTTAACCGCCTCGGCATCGAACAAGGCGACGTCATCATGCTCCTCCTCCAAAACTGTCCCCAATTCGTCTTCGCCTTCATGGGAGCCTCGTACCGTGGCGCAACTGTCACAACAGCCAACCCATTTTATACCCCATCGGAGATCGCAAAACAAGCATCGGCATCGAAAACCAAGCTCATCATCACACAAGCATCCTTCGCCCACAAGGTCAAGGATTTCGCGAGAGACAATGATGTTAAAGTGATGTGTATTGACGACGACACACTACCGGCGGAGGGTAATTTCCGACGATTCTTGGAGTTGACGGAGGGGGATGAGGGTGAGATCCCTGCCGTGAAGATCTCCCCAGACGACGTCGTAGCGTTGCCTTATTCGTCTGGCACCACTGGGATTCCAAAGGGGGTTATGTTAACCCACATGGGTCTAGTTACCAGCGTGGCACAACAAGTGGATGGAGAAAACCCTAACCTGTATTTTCACAGTGAGGATGTGATTGCGTGCGTGCTGCCTCTGTTTCACATCTACTCGCTGAACTCTGTTTTGCTTTGTGGCCTTCGAGCCGGTGCTGCCATTTTGATCATCAAGAAGTTTGAGATAGTTAGGTTGCTGGAGTTGGTACAGAAACACAGGGTGACCGTTGCACCGTTTGTGCCACCCATCTTCTTGGACATCGCCAAGACTCCGAACCTTCACCAATACGATCTGGCTTCCATTAGGATGGTGATTTCTGGTGCGGCACCCATGGGAAGGGAACTTGAGGATGCTGTGAGGGCTAAGCTTCCTAACGCCACACTCGGACAGGGATATGGGATGACGGAGGCTGGGCCGGTGCTTTCAATGTGTTTGGCGTTTGCGAAGGAGCCTTTCGAGGTCAAATCAGGTGCGTGCGGGACCGTTGTAAGAAACGCCGAGATGAAGATCGTTGACCCTGACACAGGCGTATCACTTGCTAGGAATCAAGCCGGTGAGATTTGCATTAGAGGCAACCAGATTATGAAAGGTTATTTAAACGACCCAGAGGCAACAAGGAGAACTATAGACACAGAACGATGGCTACACACGGGTGATATTGGGTACGTGGACGATGATGATGAGGTCTTCATCATAGATAGACTAAAGGAGCTAATCAAATACAAAGGCTTCCAAGTGGCCCCCGCCGAACTCGAGGCTATGCTCATTGCTCATCCTGACGTCTCTGAAGCCGCTGTTGTACCGATGAAAGATGAAGCTACAGGAGAGGTTCCGGTAGCATTTGTTTTAAGATCAAACGGTTCTAAGATTTCAGAAGATGAAATCAAACAGTACATCTCAAAACAGGTTGTGTTTTACAAGAGAATCCATAAGGTTTTCTTCGTGGACTCGATTCCCAAGGCACCCAGTGGTAAGATTTTGCGGAAAGATCTAAGAGCAAGGCTCACGGCCGCAAGCCCGTAG 1629 0.5021 METTHEFIFRSKLPDTYIPTLLPLHAYCFENLSQFKDRPCLINGTTGETFTYTDVELTSRRVASGLNRLGIEQGDVIMLLLQNCPQFVFAFMGASYRGATVTTANPFYTPSEIAKQASASKTKLIITQASFAHKVKDFARDNDVKVMCIDDDTLPAEGNFRRFLELTEGDEGEIPAVKISPDDVVALPYSSGTTGIPKGVMLTHMGLVTSVAQQVDGENPNLYFHSEDVIACVLPLFHIYSLNSVLLCGLRAGAAILIIKKFEIVRLLELVQKHRVTVAPFVPPIFLDIAKTPNLHQYDLASIRMVISGAAPMGRELEDAVRAKLPNATLGQGYGMTEAGPVLSMCLAFAKEPFEVKSGACGTVVRNAEMKIVDPDTGVSLARNQAGEICIRGNQIMKGYLNDPEATRRTIDTERWLHTGDIGYVDDDDEVFIIDRLKELIKYKGFQVAPAELEAMLIAHPDVSEAAVVPMKDEATGEVPVAFVLRSNGSKISEDEIKQYISKQVVFYKRIHKVFFVDSIPKAPSGKILRKDLRARLTAASP 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1445 542 Gene3D - 2 437 IPR042099 -
Glsi02g1445 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 5 535 - -
Glsi02g1445 542 Pfam AMP-binding enzyme 30 443 IPR000873 -
Glsi02g1445 542 ProSitePatterns Putative AMP-binding domain signature. 187 198 IPR020845 -
Glsi02g1445 542 FunFam 4-coumarate--CoA ligase 2 439 540 - -
Glsi02g1445 542 Pfam AMP-binding enzyme C-terminal domain 452 527 IPR025110 -
Glsi02g1445 542 FunFam Long-chain-fatty-acid--CoA ligase FadD 10 438 - -
Glsi02g1445 542 Gene3D - 438 540 IPR045851 -
Glsi02g1445 542 SUPERFAMILY Acetyl-CoA synthetase-like 19 538 - -
Glsi02g1445 542 CDD 4CL 18 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1445 Glsi-ChrGlsi02 12497848 12507152 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1445 6 505 Monolignol Biosynthesis Gene Families AT1G51680 69.246 0.0 712
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g1445 02 12497848 12507152 Glsi02g1445 02 12497848 12507152 ECH