Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1441 ATGGAAGCTCCTCCTCAAGAATTCATCTTCCGTTCCAAGCTCCCTGACATTCCCATCCCCACCCACCTCCCACTACACACCTACTGCTTCGAGAACCTACCCCATTTCAAAGACCGACCCTGCCTCATCAACGGCGACACCGGCGAGACCTTCACCTACTCCGAGGTGGAGCTCACCGCTCGCCGCATCGCCTCCGGCCTCCACAACCTTGGCATCCGACAAGGTGAGGTCATCATGCTCGTACTCCGGAACTGTCCCCAATTCGCTCTCGCTTTCCTGGGCGCCTCCTACCGAGGCGCGGTCGTGACCATGGCGAACCCGTTCTTCACTTCGGCCGAGCTAGCAAAACAAGCCGCGGCGTCCAAGCCGAAACTGATCATAACCCAAGCCGCTTACGTTGATAAAATCAAGGCTTTCGCTGTAAACAACGGCGTCTCATTGATGTGCATTGATGACGGGGTCCTCCATTTGTCTCAGCTGACCGAAGGTGACGAGAGCAGCATGCCAGACGTCAAGATTAGCCCAGACGACGTCGTGGCGCTTCCATATTCTTCCGGTACATGTGGGGTTCCAAAGGGAGTGATGCTAACTCACAAGAATCTGGTAACCACGGTGGCTCAGTTGGTGGATGGGGAAAACCCCAACCAGTACACTCACAGTGAGGATGTGCTTCTCTGTGTTCTTCCATTGTTTCATATCTATGCCCTCAACTCGATTTTGCTTTGTGGGATTCGAGCTGGGGCAGCCATTCTGACTATGAGCAAATTTGAAATCACTACGTTGTTGGAGGCGATTCAGAGGTACAAGGTGACGGTTGCGTCGTTTGTTCCCCCAATCTTATTGGCCATCGTCAAAAGCGAGGATACCGAGCGTTACGACTTGTCGTCTATTAGGATGGTGGTCACTGGGGCCGCACCCGTGAGCGTGGAGCTTGAACGAGCCCTGAAGGCTAAGCTTCCACGTGCCAAACTTGGACAGGGATATGGAATGACAGAGGGGGGTCCTATCTCAATAAGCTTAGCATTTGCGAAGGAGCCGATGGAGATAAAATCAGGTGCGTGCGGGTGCGTAATAAGAAACGCTGAGATGAAAATTGTGGACATAGAGACGGGAGCTTCGCTTCCAAGAAACAGAGAAGGTGAAATTTGCATAAGAGGCAACCAAGTTATGAAAGGTTACCTAAACGACCCTGAGGCCACAGAGAGAACGATAGACAAAGAGGGATGGCTTCACACAGGTGACATTGGATTCATAGATGATGACGATGAGGTCTTCATTGTGGATAGGTTGAAGGAGATTATCAAATATAAAGGGTTCCAAGTGGCCCCCGCTGAGCTTGAGGCTACGTTGATTTCTCACCCAAACATTTCTGACGCAGCTGTTGTACCAATGAAAGATGAAGCGGCTGGAGAAGTTCCCGTTGCATTTGTTGTAAGATCAAACGGTTCTAAGATCACTGGGGAAGAAATCAAACAGTACATTTCGAAACAGGTGGTGTATTACAAGAGAATCCATAAGGTTTTCTTCACTGACACGATCCCTAAAGCAGCTTCAGGCAAGATTTTGCGAAAGGATTTGAAAGGCAGGCTCACAGGAGGTCTGGCCAATTAA 1611 0.5053 MEAPPQEFIFRSKLPDIPIPTHLPLHTYCFENLPHFKDRPCLINGDTGETFTYSEVELTARRIASGLHNLGIRQGEVIMLVLRNCPQFALAFLGASYRGAVVTMANPFFTSAELAKQAAASKPKLIITQAAYVDKIKAFAVNNGVSLMCIDDGVLHLSQLTEGDESSMPDVKISPDDVVALPYSSGTCGVPKGVMLTHKNLVTTVAQLVDGENPNQYTHSEDVLLCVLPLFHIYALNSILLCGIRAGAAILTMSKFEITTLLEAIQRYKVTVASFVPPILLAIVKSEDTERYDLSSIRMVVTGAAPVSVELERALKAKLPRAKLGQGYGMTEGGPISISLAFAKEPMEIKSGACGCVIRNAEMKIVDIETGASLPRNREGEICIRGNQVMKGYLNDPEATERTIDKEGWLHTGDIGFIDDDDEVFIVDRLKEIIKYKGFQVAPAELEATLISHPNISDAAVVPMKDEAAGEVPVAFVVRSNGSKITGEEIKQYISKQVVYYKRIHKVFFTDTIPKAASGKILRKDLKGRLTGGLAN 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1441 536 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 6 527 - -
Glsi02g1441 536 FunFam Long-chain-fatty-acid--CoA ligase FadD 11 431 - -
Glsi02g1441 536 Pfam AMP-binding enzyme 34 436 IPR000873 -
Glsi02g1441 536 Pfam AMP-binding enzyme C-terminal domain 445 520 IPR025110 -
Glsi02g1441 536 FunFam 4-coumarate--CoA ligase 2 432 532 - -
Glsi02g1441 536 SUPERFAMILY Acetyl-CoA synthetase-like 13 532 - -
Glsi02g1441 536 CDD 4CL 19 526 - -
Glsi02g1441 536 Gene3D - 431 531 IPR045851 -
Glsi02g1441 536 Gene3D - 2 430 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1441 Glsi-ChrGlsi02 12454069 12458219 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1441 7 498 Monolignol Biosynthesis Gene Families AT1G51680 66.667 0.0 671