Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1394 ATGGGGGGCCTAGGTTTGAAAACCCTAAACCTCGTTAATCAGGCGTTTATCGTGAAGTTTAACTGGGGGAAAGGGCAGAACAAGGAGGCCTTGTGGGTCAGGGTCTTACGAGCTAAGTATGGTTGTGGTTCTGATATGATATTCATGGTGAAACAGAGAGCTAATTCCTCTAATGCTTGGAAGGGCTCGTGGGGAAGGAAAGCTGCGTGTGGGGGAGTTCTTCGTGACCCTGCTGGTAATTTCATCTGTGCTTTTGCGATGAATCTGGGCAAATGTACTGTCACCAAGGCAGAACTCTGGGGCATCCTCAATGGTTTCTGCCTTTTTCCGAATAACAGCATGAAGAGAACTGAATACTTTATGTTCTTCGTTTTTATCTTTTTGATACTCCCAGCCCTAGTTGTTTCGGAGTGTACATGTGATGAGGAAGATGAAGAGCGTGACAAAACCAAAGCTCTCAGATACAAACTGGCAGCCCTTGCTTCAATTCTAGTTGCCAGTACAATTGGCGTTCTAATTCCTGTTCTTGGCAAAGTTTTTCCGGCTTTAAGTCCAGAGAAGGACATCTTTTTCATCATAAAAGCCTTTGCCGCCGGCGTGATATTGTCCACAGGTTTCATTCATGTGCTTCCGGATGCATTTGAGAACTTGACCTCTCCTTGTCTAAATGAGCATCCATGGGGGGATTTTCCCTTCACAGGTTTTGTGGCTATGTGTACTGCTATGGGAACCCTTATGGTTGATGCATTTGCCACGGCGTATTTTAAGAACTCTCACTTCAACCAAGGCCAAATTGAGGATGGGGTGGATGAGGAAAAGATACCAGGTCATGAAGGGCATATGCATCTTCATACTCACGCTACACATGGTCATGCACATGGGCCGGATCCAAACTCTGCTGGGTCCACCGAACTTCTTCGACACAGAGTGATATCACAGGTATTGGAGCTTGGGATCATCGTTCATTCTGTAATAATAGGAATTTCGTTGGGAGCATCTGAGAGTCCCAAAACTATAAGGCCCTTGGTAGCTGCTCTGACTTTCCATCAGTTCTTTGAGGGCATGGGACTAGGAAGTTGTATCATGCAGGCCAAGTTCAAGGGCAAAGCTATCGCAATCATGGCGTTGTTCTTTGCTCTGACTACACCAATGGGGATTGCAATTGGTATAGGGATCACTAATGGGTACGATGAAAATAGTCCAACTGCCCTTATTGTGGAAGGAATTTTTAATGCAGCGTCATCTGGGATCTTAATTTATATGGCACTTGTGGATCTTCTAGCAGCTGATTTTATGAATGCAAGGATGCAAAGCAGTGTCCGCCTTCAAGTAGGAGCAAATGTGTCTCTTCTTCTAGGTGCTGGTTTGATGTCTCTTCTAGCAAAATGGGCTTGA 1395 0.453 MGGLGLKTLNLVNQAFIVKFNWGKGQNKEALWVRVLRAKYGCGSDMIFMVKQRANSSNAWKGSWGRKAACGGVLRDPAGNFICAFAMNLGKCTVTKAELWGILNGFCLFPNNSMKRTEYFMFFVFIFLILPALVVSECTCDEEDEERDKTKALRYKLAALASILVASTIGVLIPVLGKVFPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLNEHPWGDFPFTGFVAMCTAMGTLMVDAFATAYFKNSHFNQGQIEDGVDEEKIPGHEGHMHLHTHATHGHAHGPDPNSAGSTELLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCIMQAKFKGKAIAIMALFFALTTPMGIAIGIGITNGYDENSPTALIVEGIFNAASSGILIYMALVDLLAADFMNARMQSSVRLQVGANVSLLLGAGLMSLLAKWA 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1394 464 PANTHER ZINC/IRON TRANSPORTER 152 458 - -
Glsi02g1394 464 NCBIfam ZIP zinc/iron transport family 138 464 IPR004698 GO:0005385|GO:0016020|GO:0071577
Glsi02g1394 464 CDD RNase_H_like 59 105 IPR044730 -
Glsi02g1394 464 Pfam ZIP Zinc transporter 155 461 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Glsi02g1394 464 Pfam Reverse transcriptase-like 66 115 IPR002156 GO:0003676|GO:0004523
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1394 Glsi-ChrGlsi02 11414777 11418721 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1394 136 464 Inorganic Solute Cotransporters AT3G12750 58.929 2.82e-135 392