Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1373 ATGGCAAGCAAAATGAATGCGATTCTTGTCATGGGGCTCGCCATCGTAAGCCTTGTCTCTGTTGCGTCTGCCATTTCTGGAACTGCCACTTTTTACACAGAATACGTTCCTTCTGCATGCTATGGGTACCAAGACCAGGGAACGAACATCGCTGCTGCAAGCGACTCAATCTGGGACAACGGGGCAGCGTGTGGAAGAATGTATAGGATCACATGCACTAGCGGTACCAACGCAGGTGTGGCTCAGCCTTGCAAGGGTGGCAGTGTCACCGTGAAGATTGTGGATCGTTGCCCTTCTCCGGGATGCCAAGCCACCATTGATCTCTCTCAGCAAGCTTTCTCTGCAATCGCTGACCCTGACGAAGGAAAAATCAATATTGACTACACCCAGGTTTGA 396 0.5101 MASKMNAILVMGLAIVSLVSVASAISGTATFYTEYVPSACYGYQDQGTNIAAASDSIWDNGAACGRMYRITCTSGTNAGVAQPCKGGSVTVKIVDRCPSPGCQATIDLSQQAFSAIADPDEGKINIDYTQV 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1373 131 CDD DPBB_EG45-like 25 129 - -
Glsi02g1373 131 FunFam Barwin-related endoglucanase 24 130 - -
Glsi02g1373 131 Gene3D - 17 131 IPR036908 -
Glsi02g1373 131 PANTHER EG45-LIKE DOMAIN CONTAINING PROTEIN 1-RELATED 4 130 IPR044206 GO:0009627|GO:0048046
Glsi02g1373 131 Pfam Lytic transglycolase 51 128 IPR009009 -
Glsi02g1373 131 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 27 131 IPR007112 -
Glsi02g1373 131 SUPERFAMILY Barwin-like endoglucanases 14 131 IPR036908 -
Glsi02g1373 131 SMART dpbb_1 50 128 IPR007112 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1373 Glsi-ChrGlsi02 10876441 10877974 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1373 50 130 Expansin Gene Family AT2G45110 31.522 3.24e-08 48.5