Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1343 ATGGATATGTTTGTGGGAGGAAGTGACACTACTTCAACAACTCTGGAATGGGCTATGGCAGAACTCATGAAAAATCCAAATACAATGAAGAAAGCCCAGGAAGAGGTAAGAAGAGTGGTGGGGTATAAATCAAAGGTAGACGAAAATAATGTGAGGCAAATGAAGTACTTGGAATGTGTAGTGAAAGAAACCCTAAGATTACATCCACCCGTTCCTCTTTTGATTCCAAGAAAAACAACATCGGGTGTGAAACTAAGAGGATATGATATTCCCTCCAAGACACAAGTATTTGTGAACGCGTGGGCAATCCAGAGAGATCCTAAATATTGGGAGAGGCCAGAAGAGTTCCTTCCAGAGAGATTTGAAAACAGCGAAGTTGATTTCAAAGGCCAAAACTTCCAGTTTATCCCTTTTGGCATTGGGAGAAGAGGATGTCCTGGGATTTCATTTGGGATTGCATCCACTGAGTATGTTCTTGCTAATGTTTTATATTGGTTCGATTGGAAGCTGCCATCTGCACAACAAGACATAGACATGAGCGAAACATCCGGGATTACTGTCAGCAAGAAAGTACCACTTCATCTTCAACCAATTCCACACTCGTTCTAG 609 0.4171 MDMFVGGSDTTSTTLEWAMAELMKNPNTMKKAQEEVRRVVGYKSKVDENNVRQMKYLECVVKETLRLHPPVPLLIPRKTTSGVKLRGYDIPSKTQVFVNAWAIQRDPKYWERPEEFLPERFENSEVDFKGQNFQFIPFGIGRRGCPGISFGIASTEYVLANVLYWFDWKLPSAQQDIDMSETSGITVSKKVPLHLQPIPHSF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1343 202 PANTHER CYTOCHROME P450 71B11-RELATED 1 198 - -
Glsi02g1343 202 PRINTS E-class P450 group I signature 58 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS E-class P450 group I signature 145 168 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS E-class P450 group I signature 135 145 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS E-class P450 group I signature 15 41 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS E-class P450 group I signature 99 123 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 FunFam Predicted protein 4 195 - -
Glsi02g1343 202 SUPERFAMILY Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 138 147 IPR017972 GO:0005506|GO:0016705
Glsi02g1343 202 Gene3D Cytochrome P450 1 199 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS P450 superfamily signature 6 23 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS P450 superfamily signature 59 70 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 PRINTS P450 superfamily signature 136 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi02g1343 202 Pfam Cytochrome P450 1 189 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1343 Glsi-ChrGlsi02 10326583 10327273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1343 2 200 Cytochrome P450 AT3G26230 54.229 1.98e-81 249