Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1323 ATGGGTTTGTGTAGATCTTCCAGTTTAGCATTTCTCTGTTTGGTTCTGTGTTTGGTCATTGTTCATTTTGGAGTTTATGGGGAAGAAAATGCCTACCTCGTGAATGATATAGAGTCACTAAGATCATTCATGTCAGGCATTGTTTCAGACCCAAAAAATGCTCTGGAAAGCTGGAAGTCTACGGGTGTTCATGTTTGTAATTGGTTAGGCGTTAGATGCAACAATGCAAGCGAGAGAGTCATAGAGCTTGATCTTAGTGGAAGATCACTAGGAGGCACCATTTCCCCGGCTCTTGTTAATCTCTCCTCCTTGAGAGTTCTTGATCTTTCTGAGAATTTTTTTGTGGGTCACATTCCAAAAGAATTAGGCTTCTTAAATCAGCTTGGACAACTCAGTTTATCTTGGAACCTTCTTGAAGGGGCAATTCCCTCTGAGCTGGGTTCACTTCATAATTTATACTACATTGACATGGGAAGTAATCTGCTTGAGGGTGAGATTCCAACACCACTTTTCTGTAATGGGTCTCACTCATTAAGGTATATAGACCTCTCTAACAATTCCTTAGGGGGACAAATCCCCCTGAACAATGAGTGTATGCTTCTAGAGCTTAGGTACCTGTTACTTTGGTCTAACCAGTTTGTAGGCCAAGTTCCTTTAGCTCTTTCTAACTCCACAGAGCTCAAATGGCTCGATTTGGAGTCAAACATGCTGAGTGGGGAGCTGCCATATGAGGTTGTACGTAACTGGCCACGACTAAAATACCTCTACTTGTCATATAATGACTTTGTTAGCCATGACGGTAACACCAACCTTGAACCTTTCTTTGCTTCCTTGGCAAATTTATCTTACTTTCAAGAACTCGAATTGGCAGGAAACAATCTTGGTGGGAAGCTTCCTCATATTATAGGTGATCTTCCTACCAGCTTGGTGCAGCTTCACCTTGATGAAAATCTCATACATGGCTCTATTCCCCCTCACATTGCCAACCTTGTCAATCTGACTCTCTTGAATTTCTCCAGTAACCTTCTAAATGGATCAATCCCTCCTAGTCTCTGCCAGATGGGTAAGCTTGAGAGAGTTTATTTGTCCAATAATTCACTATCTGGGGAGATTCCTTCAGCACTTGGTGACATTCAGCATCTGGGTCTGATAGATTTGTCAAGAAACAAGCTTTCTGGTCCTATACCAGATACTTTTTCTAACCTTCCCCAATTAAGAAGGCTTTTACTATATGACAACCAGCTTTCTGGAACAATTCCACCAAGTCTAGGAAAATGTGTGAATTTGGAGATTTTAGATCTATCTCGCAACAAAATTTCTGGGGAGATTCCTACAGAAGTTGCATCCTTGATCAGCTTGAAACTATACCTGAACTTATCAAGTAATAATTTAAATGGCCCTTTACCATTAGAGCTCAGCAAAATGAACATGGTGCTAGCCATTGATCTGTCCAATAATAATCTCTGTGGCAGAATCCCACCACAACTTGAAAGCAGCATAGCACTAGAATACCTCAACCTTTCAGGTAACTCCTTAGAAGGCCCTATCCCATTTTCATTAGGCCAATTGCCTTATATAAAGGCACTTGATGTATCTTCAAATAAATTAGCTGGGGAAATACCAGAGTCCTTGCAGTTATCTTCCACTCTCAAGACAGTCAATTTCTCTTTCAACAAGTTCTCAGGGAATGTATCAAACAAGGGTGCATTTTCATCTCTGACCATAGACTCTTTCCTAGGAAATGATGGTCTCTGTGGCACCATAAAAGGCATGCCGATCTGCCATTATGAGAAACACAGCTACCATCTGGTTCTTCTTTTAATTCCAGTGTTGCTATTTGCCACTCCTCTCTTGTGCATGGTTGGGTATCGCATGGTGCCCAAGTCAAAACTCCGAAGGAAATTGGCAATAGCTGGTAGAGGGGACTTTGAGGATGATGAAGAGGAAGCAAAAGAGCTAAAGTACCCAAGAATTTCATATCAACAACTTATTGAAGCCACTGGAGGTTTCAGTGCTTCAAGGCTAATTGGTTCAGGCAGGTTTGGACAAGTCTACAAGGGTGTTCTTCAAGATAATACCAGAATAGCAGTGAAGGTTCTAGATCCTACCACAGCTGGTGAGATTTCAGGGAGCTTGAGAAGAGAGTTTCAGATTCTGAAAAGGACTAGGCACAGAAACTTGATAAGGATCATCACAATTTGCAGCAAGCCAAAGTTTAAGGCTCTTGTTCTTCCATTAATGCCAAATGGTAGCCTTGAGAGGCACCTGTATCCGAGCCATGGGTTGAGCCAGAGGTTGGGTTTGATTCAGTTAGTGAGGATATGCAGTGATGTAGCTGAGGGAATGGCTTATTTGCACCATTACTCTCCAGTGAGAGTAGTGCACTGTGATCTTAAGCCCAGCAATATACTTCTTGATGATGATATGACAGCTTTGGTGACAGATTTTGGAATTGCAAGGCTTGTGAAAAGTGATGAGAGCATGTCCTCCGACAACTCAACATCTTTCGGTTCAACACGCGGCTTGTTATGTGGCTCTGTTGGCTACATAGCCCCTGAGTATGGAATGGGAAAGCAAGCATCAACCCAAGGTGATGTTTACAGTTTCGGAGTACTTTTACTAGAAATAGTGACAGGCAGGCCTCCCACAGATGTGCTTGTCCATGAAGGCTCTAGCTTGCACGAGTGGGTGAAGAGGCAATACCCATACGAGCTTGAAAGCATTGTAGAACAAGCATTGCAAAGGTTCTCAACCTCTGCTTCTGGCCTCCCAATGCAATATTCTGACAAAATCTGGGAAGATGTTACAGTGGAACTGATAGAGCTAGGGCTTATGTGCACACAGCACAATCATCTAGCAAGGCCAAGCATGCTGGATGTAGCCCAAGAAATAGGGAGGTTGAAGGACTTCCTCTCTGATCCATCTTCTATGCTGGTTCAAGCCGTCACCCCCAAGGTTGATTCTTTTGGCAGTCAGGATAATTTAGTCGAGAAGTAA 2997 0.4271 MGLCRSSSLAFLCLVLCLVIVHFGVYGEENAYLVNDIESLRSFMSGIVSDPKNALESWKSTGVHVCNWLGVRCNNASERVIELDLSGRSLGGTISPALVNLSSLRVLDLSENFFVGHIPKELGFLNQLGQLSLSWNLLEGAIPSELGSLHNLYYIDMGSNLLEGEIPTPLFCNGSHSLRYIDLSNNSLGGQIPLNNECMLLELRYLLLWSNQFVGQVPLALSNSTELKWLDLESNMLSGELPYEVVRNWPRLKYLYLSYNDFVSHDGNTNLEPFFASLANLSYFQELELAGNNLGGKLPHIIGDLPTSLVQLHLDENLIHGSIPPHIANLVNLTLLNFSSNLLNGSIPPSLCQMGKLERVYLSNNSLSGEIPSALGDIQHLGLIDLSRNKLSGPIPDTFSNLPQLRRLLLYDNQLSGTIPPSLGKCVNLEILDLSRNKISGEIPTEVASLISLKLYLNLSSNNLNGPLPLELSKMNMVLAIDLSNNNLCGRIPPQLESSIALEYLNLSGNSLEGPIPFSLGQLPYIKALDVSSNKLAGEIPESLQLSSTLKTVNFSFNKFSGNVSNKGAFSSLTIDSFLGNDGLCGTIKGMPICHYEKHSYHLVLLLIPVLLFATPLLCMVGYRMVPKSKLRRKLAIAGRGDFEDDEEEAKELKYPRISYQQLIEATGGFSASRLIGSGRFGQVYKGVLQDNTRIAVKVLDPTTAGEISGSLRREFQILKRTRHRNLIRIITICSKPKFKALVLPLMPNGSLERHLYPSHGLSQRLGLIQLVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGIARLVKSDESMSSDNSTSFGSTRGLLCGSVGYIAPEYGMGKQASTQGDVYSFGVLLLEIVTGRPPTDVLVHEGSSLHEWVKRQYPYELESIVEQALQRFSTSASGLPMQYSDKIWEDVTVELIELGLMCTQHNHLARPSMLDVAQEIGRLKDFLSDPSSMLVQAVTPKVDSFGSQDNLVEK 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1323 998 Pfam Leucine Rich Repeat 502 521 IPR001611 GO:0005515
Glsi02g1323 998 Gene3D Ribonuclease Inhibitor 33 174 IPR032675 -
Glsi02g1323 998 FunFam LRR receptor-like serine/threonine-protein kinase FLS2 34 193 - -
Glsi02g1323 998 SUPERFAMILY RNI-like 82 368 - -
Glsi02g1323 998 Pfam Leucine rich repeat 356 415 IPR001611 GO:0005515
Glsi02g1323 998 Pfam Protein kinase domain 672 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1323 998 SUPERFAMILY L domain-like 277 578 - -
Glsi02g1323 998 Pfam Leucine rich repeat N-terminal domain 35 74 IPR013210 -
Glsi02g1323 998 SMART LRR_typ_2 330 354 IPR003591 -
Glsi02g1323 998 SMART LRR_typ_2 402 426 IPR003591 -
Glsi02g1323 998 SMART LRR_typ_2 101 123 IPR003591 -
Glsi02g1323 998 SMART LRR_typ_2 125 149 IPR003591 -
Glsi02g1323 998 SMART LRR_typ_2 427 450 IPR003591 -
Glsi02g1323 998 ProSiteProfiles Protein kinase domain profile. 670 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1323 998 SMART serkin_6 670 971 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1323 998 CDD STKc_IRAK 676 967 - -
Glsi02g1323 998 SUPERFAMILY Protein kinase-like (PK-like) 652 962 IPR011009 -
Glsi02g1323 998 ProSitePatterns Protein kinases ATP-binding region signature. 676 698 IPR017441 GO:0005524
Glsi02g1323 998 PANTHER RECEPTOR-LIKE PROTEIN 55 310 965 - -
Glsi02g1323 998 Gene3D Ribonuclease Inhibitor 176 595 IPR032675 -
Glsi02g1323 998 ProSiteProfiles Leucine-rich repeat profile. 428 450 IPR001611 GO:0005515
Glsi02g1323 998 Gene3D Transferase(Phosphotransferase) domain 1 747 978 - -
Glsi02g1323 998 FunFam Leucine-rich repeat receptor-like protein kinase TDR 277 596 - -
Glsi02g1323 998 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 747 976 - -
Glsi02g1323 998 Gene3D Phosphorylase Kinase; domain 1 642 745 - -
Glsi02g1323 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 793 805 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1323 Glsi-ChrGlsi02 9947749 9952387 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1323 36 973 Receptor kinase-like Gene Family AT3G47110 34.664 3.87e-152 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Glsi02g1323 Pkinase 3e-44 CL0016