Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi02g1317 | ATGGAAGCTAGTACAGGACTTTTTGCAGGGTCTCATAACAGCAATGAGCTTGTGGTCATAGAAGGACATGAAGAGCCTAAGCCTTTGAAGAACTTAGACGGACAGCTCTGCGAGATATGCGGTGATTCGGTGGGGTATACGGTGGACGGAGACTTGTTTGTGGCTTGTGAAGAGTGTGGTTTTCCGGTGTGCAGGCCATGCTACGAGTATGAAAGGAGGGAAGGGACACAAGTTTGCCCCCAGTGCCAGACAAGATACAAGCGTATCAAAGGAAGCCCAAGAGTGGAGGGAGATGAAGATGAAGATGATGTGGATGATATTGAACATGAATTTAAAGTGGAAGAAGAAAAGGACAAGCTAAGGCATGAAGGCATGCTGCAAGGGAAGATGAGCCATGGAGAAGATGATGGGAATGCTAAATCAGCACCAGTAGCATTAGCAAAGGTGAATGGGGAGGTGCTTGGAGAACCTGGAAGTGCAAAGTTGGATGAAAAGAAAGAGATAACAGACGATTGGAAGTTGCATCAAGGCAACCTGTGGCCTGAAACTGATGCCTCAGTTGACCCTGAAAAGGCCATGAGAGATGAAGCTAGACAGCCACTCTCAAGGAAAGTAGCAATACCATCAGGCAGACTAAGTCCTTATAGAATGATGGTTGCGACTCGGCTTATCATTCTACTATTGTTCCTTCCGTACAGAATCTTGCACCCAGTGCCTGATGCAGTTGGACTCTGGCTTACATCTGTAATTTGTGAAATCTGGCTTACTTTGTCATGGATAATTGATCAGCTTCCCAGATGGTTTCCCATTGATCGTGAGACATACCTTGATCGGCTTTCAATCAGGCTTGAACCAGAGAACAAGCCCAATTTGTTTTCTCCTATAGATGTCTTTGTCAGTACCGCGGATCCAATTAAGGAACCTCCTCTAGTTACAGCCAATACAGTTCTTTCAATCTTGGCCATGGATTACCCAGCTAATAAAATCTCATGCTATGTTTCTGATGATGGAGCTTCCTTGCTCACCTTTGAAGCTCTCCAAGAAACTGCTGAATTTGCACGGAAGTGGGTACCTTTCTGCAAAAAATATTCTACAGAGCCTCGAGCACCGGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGTCTACATATGTAAGAGATCGTCGTACTATGAAGAGAGAATATGAAGAATTTAAGGTCAGAATAAATGCACTTGTGGCTAAATCAATGAGGATTCCCCTAGAAGGGTGGACTATGAAAGATGGGACACCATGGCCAGGAAACAATACCAAAGATCATCCTGGTATGATACAAATTCTTCTTGGTCAGAGTGGAGGCCAAGAAGGAAATGCACTGCCCTGTCTTGTCTACCTGTCTCGTGAGAAAAAGCCAGGGTTTGAACACCACAGCAAAGCTGGTGCCTTGAATTCCTTGCTTCGGGTATCTGCGGTGCTAAGCAATGCTCCTTTCGTGCTTAACTTGGATTGCAACCACTATGTGAATAACAGCAAGGTTGTGAGAGAGGCCATGTGCTTCTTCATGGACCTACAAGTTGGGAAGAGTATTTGCTTTGTACAGTTCCCACAAAGATTTGACAGCCTTGATAAGCATGATCGCTATGCCAACAGAAACACTGTTTTATTTGATATAAACATGAGGTGCCTGGATGGAATTCAGGGACCTATTTATGTAGGCACAGGATGTATCTTCAGAAGAAAAGCATTATATGGCTGTGATCCCCCAAAGGTATCAAAGCGCCCAAAAATGGAAGGCTGTGGCTGCTGTCCATGCTTTGGATCCCGCAAGAAGCTACAAGTGCACTCTAAGCATGACGGAAATGAAGAGGATGCAAACGTAACAGAAGCAGATCAAGACAAGCAGCTTTTAACGTCGCCAATGAATTTTGATACTAAATTTGGAAAGTCTGCAATTCTTGTGAACTCCTCCATAACGGAAGATGGTGGAATTCCTTCTTCCTCAAATCAGGCAGCCCTGCTTAAAGAGGCCATTCATGTCATGAATTCTAGCTATGAAGACAGAACCCTATGGGGAAATGAGGTAGGTTGGAACTATGGATCTATAGCATCAGACATTCTTACAGGATTTAAGATGCACTGTCGTGGTTGGAGATCTGTATACTGCATGCCAGAGAGACCTGCATTCAGGGGTACTGCTCCAATCAACCTTACAGATCGACTTAATCAGGTGCTTAGATGGGCAATGGGATCACTTGAGATCCTCTTCAGCTCCCACTGCCCAGTATTGTACGGCTTAAACGAAGGAAAACTCAAGGGCCTTCAGAGGGTTGCCTACATAAATAGCACTGTGTACCCTTTCAGTTCAATACCCCTCCTAATATATTGTCTCCTTCCTGCCATCTGCTTGCTTACTGGAAAATTCATCACACCATCGATAAGCACTTTTGCAAGTCTCATCTTTGTTGCACTGTTCATCTCAATCTTTGCATCAAGTATTCTTGAGTTGAGATGGAGTGGAGTTAGCCTTGAGGAATGGTGGAGAAACGAGCAATTCTGGGTCATTGGCAGTGTGTCAGCGCACCTCTTTGCAATTGTAAGAGGCCCTCTGAAGGCTCTAGCTAAAGTTGATATAAACTTCGAAGTTGTATCAAAGGCACCGGATGATGGCGAGTTCCGTGATCTATACACCTTCCGATGGACTGCCCTCCTAATACCTCCAACCACTATCATAATCATCAATCTTGTAGGTATTGTAGCTGGGTTTACAGATGCCATAAACAGCGGTGATCATTCTTGGGGAGCACTCCTTGGGAAGCTCTTCTTTTCCTTATGGGTTCTTGCTCATCTCTACCCATTCCTTAAAGGTATGATGGGTAGGCAGAACCGAACACCAACCCTTGTTATCATATGGTCAATTCTTTTGGCTTCTGTTTTCTCCTTGCTTTGGGTAAGAATTGATCCTTTTGTGTTAAAAACAAAAGGACCTGACGTCAAGCAATGTGGAATCAGTTGCTGA | 3009 | 0.4437 | MEASTGLFAGSHNSNELVVIEGHEEPKPLKNLDGQLCEICGDSVGYTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEHEFKVEEEKDKLRHEGMLQGKMSHGEDDGNAKSAPVALAKVNGEVLGEPGSAKLDEKKEITDDWKLHQGNLWPETDASVDPEKAMRDEARQPLSRKVAIPSGRLSPYRMMVATRLIILLLFLPYRILHPVPDAVGLWLTSVICEIWLTLSWIIDQLPRWFPIDRETYLDRLSIRLEPENKPNLFSPIDVFVSTADPIKEPPLVTANTVLSILAMDYPANKISCYVSDDGASLLTFEALQETAEFARKWVPFCKKYSTEPRAPEKYFSEKIDFLKDKVQSTYVRDRRTMKREYEEFKVRINALVAKSMRIPLEGWTMKDGTPWPGNNTKDHPGMIQILLGQSGGQEGNALPCLVYLSREKKPGFEHHSKAGALNSLLRVSAVLSNAPFVLNLDCNHYVNNSKVVREAMCFFMDLQVGKSICFVQFPQRFDSLDKHDRYANRNTVLFDINMRCLDGIQGPIYVGTGCIFRRKALYGCDPPKVSKRPKMEGCGCCPCFGSRKKLQVHSKHDGNEEDANVTEADQDKQLLTSPMNFDTKFGKSAILVNSSITEDGGIPSSSNQAALLKEAIHVMNSSYEDRTLWGNEVGWNYGSIASDILTGFKMHCRGWRSVYCMPERPAFRGTAPINLTDRLNQVLRWAMGSLEILFSSHCPVLYGLNEGKLKGLQRVAYINSTVYPFSSIPLLIYCLLPAICLLTGKFITPSISTFASLIFVALFISIFASSILELRWSGVSLEEWWRNEQFWVIGSVSAHLFAIVRGPLKALAKVDINFEVVSKAPDDGEFRDLYTFRWTALLIPPTTIIIINLVGIVAGFTDAINSGDHSWGALLGKLFFSLWVLAHLYPFLKGMMGRQNRTPTLVIIWSILLASVFSLLWVRIDPFVLKTKGPDVKQCGISC | 1002 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi02g1317 | 1002 | SUPERFAMILY | RING/U-box | 21 | 107 | - | - | |
| Glsi02g1317 | 1002 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 198 | 969 | - | - | |
| Glsi02g1317 | 1002 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 451 | 584 | IPR029044 | - | |
| Glsi02g1317 | 1002 | Pfam | Zinc-binding RING-finger | 27 | 104 | IPR027934 | - | |
| Glsi02g1317 | 1002 | Coils | Coil | 393 | 413 | - | - | |
| Glsi02g1317 | 1002 | CDD | mRING-HC-C4C4_CesA | 35 | 85 | - | - | |
| Glsi02g1317 | 1002 | ProSiteProfiles | Zinc finger RING-type profile. | 37 | 83 | IPR001841 | - | |
| Glsi02g1317 | 1002 | Pfam | Cellulose synthase | 295 | 996 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
| Glsi02g1317 | 1002 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 308 | 822 | IPR029044 | - | |
| Glsi02g1317 | 1002 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 19 | 109 | IPR013083 | - |
Showing 1 to 10 of 11 entries
Duplication type information
Functional genes information