Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1312 ATGCATCAAGGTGATCAAACGGTGCTGAGCTTGAGGCCTGGTGGTGGTCGAGGCGGCGGCAGCGGCAGCGGCAGCAGGCTATTTGGTTCTCGATTTGACTCTTCATCATCGACGTCTTCTCCTTCCCCTGCTTTTGGTTCCTTCTCCGCTGATCTTCCACTCTTGCGCCCCCATGGCGGTGCTCCTCCTTCCTTCTCTATAAAGGCTGGAGATTCACGGTTTGAGGCCCGTGAGCGTGTGCGATACACCAGAGATCAGCTGTTACAGCTCAGAGAGGCTGTTGAGGTCCCTGATGACATTCTAAAAATAAAGAAAGATATAGAAGTTGAAATTTTTGGCGAAGATCAAAGCTGGGGCCATGCTGAAAGCAATCCGCAACAACAATTTCAAAATCGATATTCTGAGCCAGATAACCGTGACTGGCGTGGCCGGTCTGGGCAACTTCCTTCTTCTGCAGAAGAAAAGTCTTGGGAAAACCTCAGGGAGAATAGAGAGTTTGCTAATCGATATGACACAAGACAGCAGGATGGCAGTCAGACTAATCGCCAAGACCAACAGAGTTTACAGTTTTCTAAGGGAGGACCTGCTCCTACTCTAGTCAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTTTCTGAGAAGGATCGTGTCTTGAAGACTGTGAAAGGGATTCTAAATAAGTTGACTCCTGAAAAATTTGATCTCCTGAAGGGTCAATTGATTGATGCTGGCATCACATCAGCTGACATCTTGAAGGGGGTCATTTCACTTATATTTGATAAGGCTGTACTAGAACCGACATTTTGCCCCATGTATGCTCTTCTGTGTTCTGATCTTAATGAAAAGCTGCCTCCATTCCCATCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGCGAGTACTCTTGAATATCTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTGAGGGAAGAATTAAGGCAGTTGACTGCCCCTGAGCAGGAGATAGAGCGTCGCGATAAGGAAAGACTGCTCAAGCTTCGAACTCTTGGAAACATCCGTTTAATTGGAGAGCTGTTGAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTTCAGGAGCTTTTAGGACCACCTGATAGCAAGTCCTGTCCAGTTGAGGAAAATGTTGAAGCTATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTTGATGAAAGCCCAAAATCAAGGCGTATAAATGATGTTTACTTTAGCCGATTGAAAGAACTGGGAGCAAACCAGCAACTTGTACTGCGTTTGAGGTTCATGATTCGTGATGTGATTGATTTGCGTGCGAATAACTGGGTTCCAAGACGTGAAGAGGTAAAAGCCAAAACCATCACTGAAATTCATTCAGAGGCTGAAAAAAATCTTGGATTGCGTCCAGGTGCTACTGCAAGCATCAGAAATACCCGTAATTTAGTTTCTGGTGTTCAAGGGAATGCCAGCCCTGGTGGCTACCCCATTGCTCGACCAGGTACAGGGGGTTTGATGCCTGGAATGCCAGGGACCAGGAAGATGCCTGGGATGCCTGGAATTGATAATGACAACTGGGAAATGCCTAAAACTCGGTCAATGCCAAGAGGAGAGATGTCAGGTATGCAACCTGCAGGACGTGGTCAGTCTCCTTTACTTTCCAAGTCAACCCTAAGTTCAAAATTACTACCTCAAGGTAGTGGTGGTCTTATAAGTGGAAGTAGCGCCCTCCTGCATGGAGGTGGCGGTGCTCCTGCTCGCCCATCAAACGTCGGTTTAAATACCGAGCCTGCACCTGTTAAAGCTGTTTCTGCCGTGTCCTCTGAGAAGCCACAAGCTCCAGCACCAAGATTGAATACTGATGATCTCCACCGCAAAACACACTCTCTTCTGGAAGAATATTTTAGTGTTCGGCTTTTGGATGAGGCATTACAGTGTGTGGAGGAACTAAAATCTCCTGCTTATCACCCTGAGTTTGTCAAAGAAGCCATTTCCCTTGCACTAGATAAAAGTCCGCCATGTGTTGAACCTGTTGCCAATCTTCTAGAGTATCTCTTCATTAAGAAGATTCTAACTGCTAGAGACATAGGCACAGGGTGTTTGTTATTTGCTTCCTTGCTCGATGACGTTGGCATTGATTTACCTAAAGCACCAAATAATTTTGGTGTGATAATTGGGAAACTAATTTTGGCTGGGGGATTGGATTTTAAGGTGGTGAAAGAGATCCTTGAGAAAGTGGAAGATGACCTGTTCCAGAAAGCAGTATTTGATGCTGCGTTACAGGTCATTAGTTCGGCATCTGGGCAAGCTGTTTTGGAGTCACAAGCATCTGATATTGAGGCCTGCCAGAGTCTGTTCAAGTGA 2376 0.46 MHQGDQTVLSLRPGGGRGGGSGSGSRLFGSRFDSSSSTSSPSPAFGSFSADLPLLRPHGGAPPSFSIKAGDSRFEARERVRYTRDQLLQLREAVEVPDDILKIKKDIEVEIFGEDQSWGHAESNPQQQFQNRYSEPDNRDWRGRSGQLPSSAEEKSWENLRENREFANRYDTRQQDGSQTNRQDQQSLQFSKGGPAPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLNEKLPPFPSEEPGGKEITFKRVLLNICQEAFEGADKLREELRQLTAPEQEIERRDKERLLKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLDESPKSRRINDVYFSRLKELGANQQLVLRLRFMIRDVIDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNTRNLVSGVQGNASPGGYPIARPGTGGLMPGMPGTRKMPGMPGIDNDNWEMPKTRSMPRGEMSGMQPAGRGQSPLLSKSTLSSKLLPQGSGGLISGSSALLHGGGGAPARPSNVGLNTEPAPVKAVSAVSSEKPQAPAPRLNTDDLHRKTHSLLEEYFSVRLLDEALQCVEELKSPAYHPEFVKEAISLALDKSPPCVEPVANLLEYLFIKKILTARDIGTGCLLFASLLDDVGIDLPKAPNNFGVIIGKLILAGGLDFKVVKEILEKVEDDLFQKAVFDAALQVISSASGQAVLESQASDIEACQSLFK 791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1312 791 MobiDBLite consensus disorder prediction 1 69 - -
Glsi02g1312 791 SUPERFAMILY ARM repeat 620 778 IPR016024 -
Glsi02g1312 791 Coils Coil 315 335 - -
Glsi02g1312 791 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 62 779 IPR045208 GO:0003743
Glsi02g1312 791 MobiDBLite consensus disorder prediction 119 134 - -
Glsi02g1312 791 MobiDBLite consensus disorder prediction 118 157 - -
Glsi02g1312 791 FunFam Eukaryotic translation initiation factor isoform 4G-2 620 781 - -
Glsi02g1312 791 SUPERFAMILY ARM repeat 214 449 IPR016024 -
Glsi02g1312 791 SMART ma3_7 627 739 IPR003891 -
Glsi02g1312 791 MobiDBLite consensus disorder prediction 583 624 - -
Glsi02g1312 791 Gene3D - 619 786 - -
Glsi02g1312 791 SMART if4_15 220 446 IPR003890 GO:0003723|GO:0005515
Glsi02g1312 791 ProSiteProfiles MI domain profile. 626 748 IPR003891 -
Glsi02g1312 791 MobiDBLite consensus disorder prediction 172 193 - -
Glsi02g1312 791 MobiDBLite consensus disorder prediction 169 198 - -
Glsi02g1312 791 MobiDBLite consensus disorder prediction 27 46 - -
Glsi02g1312 791 Pfam MIF4G domain 220 446 IPR003890 GO:0003723|GO:0005515
Glsi02g1312 791 MobiDBLite consensus disorder prediction 526 557 - -
Glsi02g1312 791 Gene3D - 211 447 - -
Glsi02g1312 791 FunFam Eukaryotic translation initiation factor isoform 4G-2 211 447 - -
Glsi02g1312 791 Pfam MA3 domain 628 739 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1312 Glsi-ChrGlsi02 9785795 9792784 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1312 1 789 Eukaryotic Initiation Factors Gene Family AT5G57870 64.589 0.0 967