Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1282 ATGACTTTGCTGCGCAAATTGTTCTTTCGTAAGCCCCCTGATGGGCTTCTTGAGATCTGTGAGAGAGTTTATGTTTTTGATTGCTGCTTCACGACGGATGCTTGGAATGAAGAAAATTATAAAGTCTACATGGACGGGATTGTTGGTCAAATTCGAGAGCACTTGCCTGATGCTTCAATCTTGGTCTTCAATTTCCGCGAGGAAGAAACAAAGAGTCAGATGGCTAACATATTGTCTGACTATGACATGACTATTATGGATTACCCTCGGCAATATGAGGGTTGTCCAGTGCTCAAAATGGAGGTCATCCACCACTTTCTAAGGTCAGGTGAAAGTTGGCTGTCACTTGGGCAGCATAATGTGCTGTTGATGCATTGTGAACGTGGTGGCTGGCCAGTTTTAGCTTTCATGCTGGCTGCACTCTTGATTTATCGGAAGCAATATAGTGGGGAACAGAGGACTTTGGATATGGTTTACAGGCAGGCTCCACGTGAGCTTTTGCATTTCTTGACACCATTAAATCCAATCCCTTCCCAACTGAGGTATCTGCAGTATGTTTCAAGGAGGAATGTGGCCATAGATTGGCCTCCATTGGACAGGGCACTCACATTGGACTGCATCATTCTCAGATTTATCCCAAACTTTGATGGGGAAGGTGGTTGTCGTCCAATATTTCGAATTTATGGACAGGATCCTTTTATTGCCGATAAAACTCCAAAAATCCTGTACTCAACACCAAGGAGAAGCAAAACTGTCCGAGGTTACAAGCAGGGAGAGTGCGAACTAATTAAAATTGATATCAACTGCCATATCCAAGGTGATGTTGTGATTGAGAGCATTAACTTGATTGGTGACATGGACCATGAACAGATGATGTTCCGAGTCATGTTCAATACGGCTTTTATTAGGTCTAATATACTGATGCTTAACCGGGATGAAATTGACACTTTATGGGATACTAAAGATCACTTCCCAAAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGATGGATGCTGCTGCCACTGTTATCACGGATGGTACTTCATGCTTTGAAGAGGAGGGACTGCCAGTGGAAGCATTTGCCAAAGTTCAAGAGATCTTTAACCATGTGGACTGGTTGAATCCTAAGGCGGATATTGCACTCAATGTACTCCAACAGATGAATGCATCGAATATCATGCATGACAAGTTGGATACAAGTTCTCCGGAGACTGGATCTTTATTGCATGATACAGGGGATGAGCCCGTCAAGATTGGTGCTACTTCACAACTACCTGGTAGGTTGGACATCATCTGTCAGGAGTTGCCCATTGCTTCTGAGAGAATCTCAGAGTCCAGTAAATCTGTGACAAATTCTGCAAAACTTGGTGTCAAACCACAGGTGGATGATAATCTTGCTTTATCTGGTTCTGTTGATACTTCTAGTGTATCACTTTCACCAAAAACACCTCCACTTCGGCCTTCCTTGATTAGTAGTTCTAAAGAAGCTTATGATTCTCCTCTCCACACACAACCACTTCCTCATCATCTTTCCCCTTTGGAACCAAGATATACTGCAACTGGAGATTCTGAAGCCCAATTACAGGACAGAAGTAAGTCATCTGTTTTTAGCTCAACAGCTGGGACTCCATTGTCAGGTACCTTTCCAAATAAGTTGCCATCTGATGTTGCTTCCCATACTTCAGCTTCAGCAATTTCTCCAACTCAACCACTTCCTCTCCCTACAACCCCTATGAAGGAGATTCTACCAGTTAGATCCAGACCTGCATCATCCCCTTCCCAGCCGCCAACACCACCTGGTCCTCCAACACCTCCTCTAAAGGAGCATAAACCGGTCAGAGCAGTACCTCCTCCACCCCCACCACCCCCGAAGAAGGAGCAACCACTGGTTAGAGCTGTACCTCCTCCACCCCCACCACCTCTGCCATCCTTAGAGAAGGAAAAACTACATGGTCGACCTGGACCCCCTCCCCCTCCACTGCCCCCTCTGAAGAAGGAGCCACATGTTAGATCCGGACCTCCTCCTCCCCCACCACCTCCTTTAAAGGAGGACCTACCTGTTAGAGCCCGACCTCCTCTGCCTCCACCACCACCACCACCACCACATATTTCTGGGAAAGCTGCGGATCTTACCATAGCAACGCCGCCTCCTCCTCCTCCTCCTGCTGCAGCACTTGCCTCCAAGCACCCTAATCCTTCATTGCAGAATTCTTCGCCTGCTCCTAATGCTCCACCACCTCCAGTTCCCTTTGATAAAGGAGGTCTAAAACCAGGTAATGCTTTTTCAAAATCTCATTTTTTAGGTGGTGATGGAAATAATGTATCAAGTACAACAGGACCTCAATCTAGCTCGCCCACTGGATCAAAGGGAAGAATTCTATCACGTACGATAAGCTCAAAAAATCATACCAAAAAATTGAAGCCATTGCATTGGTTGAAGATATCTAGAGCAGTGCAAGGAAGTTTGTGGGCTGAGACTCAGAAATCTGGTGAAGCTTCCAAAGCCCCAGAGATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAATCCCCAGTTCAGGACCTGCCAAGAAATCAGGTGTCAACAGCTCAGTTGGGCCTAAATCTGATAAAGTGCAACTGATTGAGCACAGGCGAGCATATAATTGTGAAATCATGCTTTCCAAAGTGAAAGTGCCATTGCATGATTTGATGAGCTCGGTGCTAGCACTAGAAGACTCAGCACTGGACACTGATCAGGTTGAGAACCTCATCAAGTTTTGTCCTACGAAAGAGGAGATAGAATTACTCAAGGGTTATACTGGAGAAAAGGAGAAATTAGGGAGATGTGAACAGTTTTTCTTAGAGTTGATGAAAGTACCACGGGTAGAATCCAAGCTCAGAGTTTTTTCATTCAAGATTCAGTTCCACTCTCAGATAAAGAACTCTGTCAAATTGAAGAGAATTATGCAAACGATACTTTCTTTGGGAAATGCTTTGAACCAAGGGACTACCAGGGGCTCTGCTATTGGATTTAGATTGGATAGCCTTCTTAAACTCACCGAGACACGTGCGCGGAACAACAAGATGACTCTCATGCATTATCTTTGTAAGGTGTTGGCTGACAAATTACCAGAAGTTCTAGACTTCTCCAAGGATCTTGCTAACCTAGAGCCTGCAGCAAAGTTCCAATTGAAGTTTCTGGCAGAGGAGATGCAAGCTATAAGCAAAGGATTAGAGAAAGTTATCCGGGAACTTTCGACCTCTGAAAATGATGGTCCTATATCAGAAACATTCCGCAAGAATTTGAAAGAGTTCCTCCGTTCTGCGGAAGCCGAAGTCCGATCATTGGCTTCAATATATTCCAGCGTGGGTAGGAACGTGGACGCATTGATTATTTACTTTGGTGAAGATCCATCTCGCTGCCCTTTTGAGCAAGTTGCCTCAACTTTGCTCAACTTCACAAGAATGTTCAACAAAGCCCTTGGAGAGAACTGCAAGCAACTTGAGCTTGAAATGAAGAAAGCAGCAGAAACTGAGAAAAAGATATGTGAATCAGAACGGATATTACCTGCTGCAATCTGGACCGGCAATGTCAAGTGA 3588 0.449 MTLLRKLFFRKPPDGLLEICERVYVFDCCFTTDAWNEENYKVYMDGIVGQIREHLPDASILVFNFREEETKSQMANILSDYDMTIMDYPRQYEGCPVLKMEVIHHFLRSGESWLSLGQHNVLLMHCERGGWPVLAFMLAALLIYRKQYSGEQRTLDMVYRQAPRELLHFLTPLNPIPSQLRYLQYVSRRNVAIDWPPLDRALTLDCIILRFIPNFDGEGGCRPIFRIYGQDPFIADKTPKILYSTPRRSKTVRGYKQGECELIKIDINCHIQGDVVIESINLIGDMDHEQMMFRVMFNTAFIRSNILMLNRDEIDTLWDTKDHFPKDFRAEILFSEMDAAATVITDGTSCFEEEGLPVEAFAKVQEIFNHVDWLNPKADIALNVLQQMNASNIMHDKLDTSSPETGSLLHDTGDEPVKIGATSQLPGRLDIICQELPIASERISESSKSVTNSAKLGVKPQVDDNLALSGSVDTSSVSLSPKTPPLRPSLISSSKEAYDSPLHTQPLPHHLSPLEPRYTATGDSEAQLQDRSKSSVFSSTAGTPLSGTFPNKLPSDVASHTSASAISPTQPLPLPTTPMKEILPVRSRPASSPSQPPTPPGPPTPPLKEHKPVRAVPPPPPPPPKKEQPLVRAVPPPPPPPLPSLEKEKLHGRPGPPPPPLPPLKKEPHVRSGPPPPPPPPLKEDLPVRARPPLPPPPPPPPHISGKAADLTIATPPPPPPPAAALASKHPNPSLQNSSPAPNAPPPPVPFDKGGLKPGNAFSKSHFLGGDGNNVSSTTGPQSSSPTGSKGRILSRTISSKNHTKKLKPLHWLKISRAVQGSLWAETQKSGEASKAPEIDMSELESLFSAAIPSSGPAKKSGVNSSVGPKSDKVQLIEHRRAYNCEIMLSKVKVPLHDLMSSVLALEDSALDTDQVENLIKFCPTKEEIELLKGYTGEKEKLGRCEQFFLELMKVPRVESKLRVFSFKIQFHSQIKNSVKLKRIMQTILSLGNALNQGTTRGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDLANLEPAAKFQLKFLAEEMQAISKGLEKVIRELSTSENDGPISETFRKNLKEFLRSAEAEVRSLASIYSSVGRNVDALIIYFGEDPSRCPFEQVASTLLNFTRMFNKALGENCKQLELEMKKAAETEKKICESERILPAAIWTGNVK 1195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1282 1195 SUPERFAMILY Formin homology 2 domain (FH2 domain) 717 1171 - -
Glsi02g1282 1195 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 337 IPR035892 -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 713 727 - -
Glsi02g1282 1195 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 187 IPR029021 -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 590 645 - -
Glsi02g1282 1195 Coils Coil 1154 1174 - -
Glsi02g1282 1195 PANTHER FORMIN-J 1 665 - -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 767 798 - -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 471 801 - -
Glsi02g1282 1195 Gene3D Formin, FH2 domain 796 1164 IPR042201 -
Glsi02g1282 1195 ProSiteProfiles Formin homology-2 (FH2) domain profile. 797 1179 IPR015425 -
Glsi02g1282 1195 Gene3D - 198 340 - -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 522 570 - -
Glsi02g1282 1195 Gene3D Protein tyrosine phosphatase superfamily 15 197 IPR029021 -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 654 705 - -
Glsi02g1282 1195 SMART PTEN_C2_2 197 336 IPR014020 -
Glsi02g1282 1195 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
Glsi02g1282 1195 SMART it6_source 797 1189 IPR015425 -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 471 500 - -
Glsi02g1282 1195 Pfam Formin Homology 2 Domain 801 1153 IPR015425 -
Glsi02g1282 1195 ProSiteProfiles C2 tensin-type domain profile. 199 337 IPR014020 -
Glsi02g1282 1195 MobiDBLite consensus disorder prediction 738 753 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1282 Glsi-ChrGlsi02 9490848 9499985 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1282 1 411 Protein tyrosine phosphatase (PTP) family AT5G58160 66.507 0.0 619