Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1265 ATGTACCCTTCTTCTTCCCTCCTTGGGGAGCACAAGGATCAGTCTGTTGCTGCGCTTCCAATTGATGAGCTTATTGAGAAGGCTGATGGCTTTGCTGGGGTCTTTCCCGAGCACAAATACGAGATTGTGAAGAGACTCCAAGACAGAAAGCACATATGTGGGATGACAGGAGATGGGGTGAACGATGCTCCTGCACTGAAAAGGGCAGATATTGGAATTGCAGTGGCTGACGCAACCGATGCAGCTCAAAGTGCGTCTGACATAGTCTTGATAGAACCTGGTTTGAGTGTGATTGTGAGTGCAGTGTTGACAAGCAGAGCCATTTTCCAGAGAATGAAGAACTACACCATCTATGCTGTTTCTATAGCAATCAGAATCGTGTTGGGGTTCATGCTGCTTGCTCTTATCTGGAAATTTGATTTCTCTTGCTTGTCACAGCCTTTCTCATAG 450 0.4644 MYPSSSLLGEHKDQSVAALPIDELIEKADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKRADIGIAVADATDAAQSASDIVLIEPGLSVIVSAVLTSRAIFQRMKNYTIYAVSIAIRIVLGFMLLALIWKFDFSCLSQPFS 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1265 149 Pfam haloacid dehalogenase-like hydrolase 24 70 - -
Glsi02g1265 149 SUPERFAMILY HAD-like 20 102 IPR036412 -
Glsi02g1265 149 PRINTS H+-transporting ATPase (proton pump) signature 87 112 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g1265 149 PRINTS H+-transporting ATPase (proton pump) signature 56 72 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g1265 149 PRINTS H+-transporting ATPase (proton pump) signature 28 44 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Glsi02g1265 149 FunFam Plasma membrane ATPase 1 104 - -
Glsi02g1265 149 Gene3D - 94 143 - -
Glsi02g1265 149 Gene3D - 1 93 IPR023214 -
Glsi02g1265 149 PANTHER CALCIUM-TRANSPORTING ATPASE 1 142 - -
Glsi02g1265 149 NCBIfam HAD-IC family P-type ATPase 31 136 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1265 Glsi-ChrGlsi02 9255041 9255573 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1265 1 141 Primary Pumps ATPases AT5G62670 91.489 1.93e-86 269