Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1244 ATGGCAACCAAGCAATTTTTTCTTCTTCTCTTCTCTGTTTTCCTTCATCTCTTCCAATTTCACCCATCAACTTCACAAAGTTGGATCAAAGCTGGATATTGGTATGCTGATAGTGAATCCCCCATTCCAGACATAAACTCTGCTTTGTTCACCCACCTTATTTGCTCCTTTGCTGATGTCAATTCTTCCACTTTCCAGCTTTCCATTTCCAAAGCTGATGAACAATACTTTTCCAGCTTCACCACCATCGTCAGGCGCAAGAACCCCTCTATTGTCACCCTTATATCCATTTGGAATGGACAAGCTTCTACAGCACAGGGCATTTTGGGTAAGAAGGCAAACACTTCGGTCCTTTCCTCAATGCTCACAGACGCTTCTTCTAGGAAAGGTTTCATTGAGTCCTCAATACAAACAGCTAGGCTTCATGGGTTCCAAGGCATAGACTTGTTTTGGCTTTGGCCTCAAACAGGTTCTGATATGACCCACATGGAAGTTCTCCTTGATGAGTGGCGAGCTGCTGTGGATTCTGAGACTAGAACCTCTGGAGAATCCCCATTGATATTGACCATGGCCCTTCATTACTTGCCTACCACTTTTGGGAATTTGAGTTATCCAGTTGATTCTATAAAGAGGAATTTAGATTGGGCACATGTTGTGGCTTATGATTATCATCTGCCTTCTCTGGAAAATTTCACACATGCCCATGCTGCTCTATATGACCCTCTGAGCCATGTGAATACTGATTTTGGTATAAGGGAATGGTTAAGAAGAGGATTTCCTTCAAACAAGCTGCTTTTGGGATTGCCTTATCATGGCTACGCATGGGCATTAGATAGTCCCAAGGAAACTGCTATTGGTGCACCATCATCAGGTCTGGCTGTGACACAAGATGGGTCTATGAGCTATAAGTACATCAAGTGGTATGTTCGCAGTTATGGTGCTTCTACCTCGTATAATGCTACCTATGTCGTGAATTACTGCACCATTGGTTCTATTTGGATTAATTTTGATGATGTTGAAGCCATAAGAGCTAAGATTGCTTATGCCAAAGAAAAGAAGCTGCTGGGGTACAATGTGTTTCAGGTGATCAACGACGATAGTTGGGTGCTTTCTGAGGCAGCTCAAGAGGAAGAAAATGATCATGGAAACAAAAAGAACCTATTGCTTACCATTTTGCTTCCTGTTGCAATTATCATAATTATAGGAGTCTCCTTCCTATGCTGCTTAAGAAGCAGAGCAATCAAGTCAAAAGTGAAGATGGTTTATGATAGAAGTTGCTTATCTAAACCGAAAGTTATCATGTCAAATGCTACGAGTCTTGAAAATAATGCTCCACATCTTGAAGAATATAGCTTTTCCGTCATAAGAGCAGCAACAAAAGACTTTTCTATTGAAAACAAGCTTGGAGAGGGTGGATTTGGCTCTGTTTACAAGGGAAAACTACCAAGAGGACGAGAAATTGCAGTCAAGAGACTTTCAAAAGCATCAACTCAAGGGCATGAAGAATTTACAAATGAGGTTTCCCTTACGGCAAGGCTTCAGCATGTCAATCTGGCTAGAGTTTCGGGATTCTGCATTGAGAGGGAAGAAAAAATGTTAATTTATCAGTATATGCCAAACAGAAGCTTGGATTTCTACCTCTTTGATCCAATAAGAAGGTATGTGTTGGATTGGAGAAAGCGGGTTTATATAATTGAAGGAATTATTCAAGGGCTTTTGTATCTCCAAGAATATTCAAACTTTACGATAATACACCGAGATTTGAAAGCTAGCAACATCTTGCTTGATGATGAAATGAATCCAAAAATATCAGATTTTGGAATGGCTAAACTTTTCAAAAAAGATGAACTTGAAGCGAAGACTGGACGAATTGTTGGAACATATGGTTATGTTCCTCCAGAATACGTGAAAACAGGCACATACTCTATGAAGTATGATGTTTATAGCTTTGGAGTACTACTTCTGCAAATCATAAGTGGCAAGAGGAATACTTGCTATTATGGCACCCATGAAAACTTGAGCATTCTTGAATATGCACATAATTTGTGGAAAGAGGGTAAAGGGATGGAATTTGTTGATCCATCTCTGGATGATTCATCTTCTTCCTGCAAACTTCTGCAGTGTTTGCAAGTAGCCCTACTGTGTGTGCAGGAAAATCCAGTTGAAAGGCCATCAATGTTGGAAGTTTCTTCCATGCTTAAAAATGACATGGAGGCAATTCCTTTGCCTAAAAGGCCAGCTTTCTCAACAAAAAGTGATGAGAAATTTGAAAACAGATCTTCATCACAGCAAGGAAGTTGTTCCATCAATGATGCTTCGATTTCCCAAATGGAACCCAGATAA 2343 0.402 MATKQFFLLLFSVFLHLFQFHPSTSQSWIKAGYWYADSESPIPDINSALFTHLICSFADVNSSTFQLSISKADEQYFSSFTTIVRRKNPSIVTLISIWNGQASTAQGILGKKANTSVLSSMLTDASSRKGFIESSIQTARLHGFQGIDLFWLWPQTGSDMTHMEVLLDEWRAAVDSETRTSGESPLILTMALHYLPTTFGNLSYPVDSIKRNLDWAHVVAYDYHLPSLENFTHAHAALYDPLSHVNTDFGIREWLRRGFPSNKLLLGLPYHGYAWALDSPKETAIGAPSSGLAVTQDGSMSYKYIKWYVRSYGASTSYNATYVVNYCTIGSIWINFDDVEAIRAKIAYAKEKKLLGYNVFQVINDDSWVLSEAAQEEENDHGNKKNLLLTILLPVAIIIIIGVSFLCCLRSRAIKSKVKMVYDRSCLSKPKVIMSNATSLENNAPHLEEYSFSVIRAATKDFSIENKLGEGGFGSVYKGKLPRGREIAVKRLSKASTQGHEEFTNEVSLTARLQHVNLARVSGFCIEREEKMLIYQYMPNRSLDFYLFDPIRRYVLDWRKRVYIIEGIIQGLLYLQEYSNFTIIHRDLKASNILLDDEMNPKISDFGMAKLFKKDELEAKTGRIVGTYGYVPPEYVKTGTYSMKYDVYSFGVLLLQIISGKRNTCYYGTHENLSILEYAHNLWKEGKGMEFVDPSLDDSSSSCKLLQCLQVALLCVQENPVERPSMLEVSSMLKNDMEAIPLPKRPAFSTKSDEKFENRSSSQQGSCSINDASISQMEPR 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1244 780 Gene3D - 270 336 IPR029070 -
Glsi02g1244 780 CDD STKc_IRAK 468 735 - -
Glsi02g1244 780 ProSiteProfiles Protein kinase domain profile. 462 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1244 780 ProSitePatterns Serine/Threonine protein kinases active-site signature. 583 595 IPR008271 GO:0004672|GO:0006468
Glsi02g1244 780 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 28 381 IPR001223 GO:0005975
Glsi02g1244 780 Gene3D Glycosidases 44 366 - -
Glsi02g1244 780 CDD GH18_plant_chitinase_class_V 26 371 - -
Glsi02g1244 780 SMART serkin_6 462 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1244 780 MobiDBLite consensus disorder prediction 743 780 - -
Glsi02g1244 780 ProSitePatterns Protein kinases ATP-binding region signature. 468 490 IPR017441 GO:0005524
Glsi02g1244 780 Pfam Glycosyl hydrolases family 18 32 362 IPR001223 GO:0005975
Glsi02g1244 780 SMART 2g34 28 365 IPR011583 GO:0008061
Glsi02g1244 780 FunFam Chitotriosidase-1 270 336 - -
Glsi02g1244 780 Gene3D Phosphorylase Kinase; domain 1 436 537 - -
Glsi02g1244 780 Pfam Protein kinase domain 463 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1244 780 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 114 780 - -
Glsi02g1244 780 Gene3D Transferase(Phosphotransferase) domain 1 538 742 - -
Glsi02g1244 780 FunFam Uncharacterized protein 538 742 - -
Glsi02g1244 780 SUPERFAMILY Chitinase insertion domain 271 336 IPR029070 -
Glsi02g1244 780 SUPERFAMILY Protein kinase-like (PK-like) 446 757 IPR011009 -
Glsi02g1244 780 MobiDBLite consensus disorder prediction 759 780 - -
Glsi02g1244 780 SUPERFAMILY (Trans)glycosidases 29 382 IPR017853 -
Glsi02g1244 780 FunFam Uncharacterized protein 437 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1244 Glsi-ChrGlsi02 8952763 8957594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1244 449 780 Receptor kinase-like Gene Family AT4G23150 50.296 2.57e-113 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Glsi02g1244 Glyco_hydro_18 8.8e-61 CL0058