Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g1224 | ATGGCTGGCATGCTTCCTGGAGTTGAATCTGCTCGAAGGAGACGGTTCCATCAGAGCGGGGGATGGTCAGATTCCACAGCCATGGCTGCCCCTAATTCGACTAGGCGATCTTCTTTCTGTTTGTATTCTAGCAAACATGAATCCCTTCTTTCCTCTTCCTCTTCACTGCAAAGAAGTATGTTATACCAGGCACGCCCAGATGAGAAGCTGGGAGGAGCAGCCAGAGAAGCCAAAGAAAGATTGGATGAGAGATTTAGAGCACAGAAGAAATCACATAACAAAAGGCAAAACTGCAAAGAGAAATTGAACACGGAAGGCAGATCCACAGCTTTGTCAGAGTTGCACATAGAGGTATATGGGGCAAAGAAAAGTGGGTCAAGGATGTTCAACTGGACCAAACTGAGCTGGAAGGCCTCAGAGCAAGACGATTGCGCGGTGTGCCTGGAGTCGTTCAAAGTTGGGGAGACACTGATCCACCTACCCTGTGCCCATAGGTTCCATTCCAAATGCTTGGAGCCATGGCTACAAAATAATCCTCACTGCCCATCTTGCAGAATGTCCATTTTCTCTCCTTAA | 576 | 0.4792 | MAGMLPGVESARRRRFHQSGGWSDSTAMAAPNSTRRSSFCLYSSKHESLLSSSSSLQRSMLYQARPDEKLGGAAREAKERLDERFRAQKKSHNKRQNCKEKLNTEGRSTALSELHIEVYGAKKSGSRMFNWTKLSWKASEQDDCAVCLESFKVGETLIHLPCAHRFHSKCLEPWLQNNPHCPSCRMSIFSP | 191 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g1224 | 191 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 125 | 190 | IPR013083 | - | |
Glsi02g1224 | 191 | SMART | ring_2 | 144 | 184 | IPR001841 | - | |
Glsi02g1224 | 191 | PANTHER | SI:CH211-59O9.10 | 11 | 189 | - | - | |
Glsi02g1224 | 191 | FunFam | Zinc finger family protein | 118 | 190 | - | - | |
Glsi02g1224 | 191 | MobiDBLite | consensus disorder prediction | 85 | 104 | - | - | |
Glsi02g1224 | 191 | SUPERFAMILY | RING/U-box | 129 | 190 | - | - | |
Glsi02g1224 | 191 | Pfam | Ring finger domain | 142 | 185 | IPR001841 | - | |
Glsi02g1224 | 191 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Glsi02g1224 | 191 | ProSiteProfiles | Zinc finger RING-type profile. | 144 | 185 | IPR001841 | - | |
Glsi02g1224 | 191 | CDD | RING-H2_PA-TM-RING | 143 | 185 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g1224 | Glsi-ChrGlsi02 | 8661243 | 8662044 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g1224 | 1 | 86 | C3H Transcription Factor Family | AT2G15580 | 49.474 | 5.46e-18 | 73.9 |