Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Glsi02g1222 | ATGGGTGCCACCAATAGTCGACCCGTTTCTCGCACGTCTGCTCCCGGAGTCAACGACGCCAACCGCTTCAGACTATCCTCTCTTCTCTGCGGTACCTCCACCTCCCACTCTAATTATGAGATTGAAGATCATCCAACTGAACTTCTGGTAGATTCTTCTGCTACAGACTTTGGCGATGAAGTTCAGAAAGTCCGTGAGGAATCGTCTTTATCATGTTGTACAGAAGCTAGAATTAGCAGCTCTCATGCTGAAACTGCAACTTCATTTGATAGCAGAATTGAATCCAGTGGGAATGCTACTCTTGAAGGTTCTTCCAGAAATGTTGCAACTAGTGATCAGAGGAAGGGCTTGTTTCAATGTAGGGAGTTAGTTCTTCCTCATGAGGTAAGCGCTGATTATAGTCATGATGAATCTTATAGGGACAATAGCAACACAGCTAGTACTTCATTTGTAGAACAGCAGTCTTCAGGTCCACTCTCTGTAAATGTTTCTGCTAACAAGGATGCAATCAATAACATTGATAATTCAGTGGATAGTAGGATCTCTCAAATCTCTGGTGAGACATTGCATCCATGGAGCTCATCCCCTCAAGGGTATGGAGATTCCAGTTCTGATGAAATTTCTGCTGAGAGTCATACTAGTGCAATTACTGCTATCCAGAATTCTGATTCCAATTCTGGTTCTCAAGTTTCCGATTTACCAGCCACTTCTCAGTTGCCAGAAAATGAATCTCATGAAGATACAATTCCTTCAGGTTTAGGTTTTCTTGTGTCCAACTGGGAAAGAAGACATGGAAATGAAAGTGTGCTTCATGTTGATGTGATTACAATATCTTCCAACAATTTGTCTCCTAGTAATGCTGATGTCAGTGATCAGGATGCCAGAGGGAATGGTGGAAGACTATTTTGGGATGCTTTTTCACCTCGTAGTTCTAGAAGGCTTGGTGTTTCTCCAACTATTGTCTTCTCAGCTGGTGATGATCCAGTATCTCAAGATCAATGGATTCTTGATTTGAGTAGTGATTTCTCAAATGATGAGGTTGGAGAGGATTCTCAATACCTCGGCAGTAGAATCCACAGATTGCATGAACGGATGCCACACTCAAGATCTGAGATCTGGGGAAGACTACGTGGTGGCCTTAATGAGATTGGACCGTGGAATACATCTTGTCCATTAGGACTCCACCCTGACGGCATGTGTTCATGTGAATCTTTCTCGATAGCTGAGGAATCCAGCACTCAAGCAAGTATATCAAGAATAGTCATGCTTGCAGAAGCTTTGTTTGAGGTTTTAGATGACATTCATCACCAACCTCTGTTGTCTTCCTTATCCATGGTCTCTCTTCCAGCGCCAGTATCAATTGTTGACTCTTTCCCTTTGAAGTGTCACAAAAAGGTTGACTCAGCTGATGGTGGCAGTGCCAGTGATTCTGAACAATGTTACATATGCCTGGCGGAGTACGAAGAAGGGGACAAAATACGAGTTCTTCCTTGCAACCATGAGTATCACATGTGCTGTGTTGATAAGTGGCTTAAAGAAATACATGGTGTATGTCCTCTTTGTCGTGGGAATGTTTGTGGAGGGTTCACCGAGTCTTCTGCCCCTTAA | 1608 | 0.4322 | MGATNSRPVSRTSAPGVNDANRFRLSSLLCGTSTSHSNYEIEDHPTELLVDSSATDFGDEVQKVREESSLSCCTEARISSSHAETATSFDSRIESSGNATLEGSSRNVATSDQRKGLFQCRELVLPHEVSADYSHDESYRDNSNTASTSFVEQQSSGPLSVNVSANKDAINNIDNSVDSRISQISGETLHPWSSSPQGYGDSSSDEISAESHTSAITAIQNSDSNSGSQVSDLPATSQLPENESHEDTIPSGLGFLVSNWERRHGNESVLHVDVITISSNNLSPSNADVSDQDARGNGGRLFWDAFSPRSSRRLGVSPTIVFSAGDDPVSQDQWILDLSSDFSNDEVGEDSQYLGSRIHRLHERMPHSRSEIWGRLRGGLNEIGPWNTSCPLGLHPDGMCSCESFSIAEESSTQASISRIVMLAEALFEVLDDIHHQPLLSSLSMVSLPAPVSIVDSFPLKCHKKVDSADGGSASDSEQCYICLAEYEEGDKIRVLPCNHEYHMCCVDKWLKEIHGVCPLCRGNVCGGFTESSAP | 535 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Glsi02g1222 | 535 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 457 | 527 | IPR013083 | - | |
Glsi02g1222 | 535 | PANTHER | RING ZINC FINGER DOMAIN SUPERFAMILY PROTEIN-RELATED | 1 | 534 | - | - | |
Glsi02g1222 | 535 | MobiDBLite | consensus disorder prediction | 132 | 162 | - | - | |
Glsi02g1222 | 535 | ProSiteProfiles | Zinc finger RING-type profile. | 480 | 522 | IPR001841 | - | |
Glsi02g1222 | 535 | SMART | ring_2 | 480 | 521 | IPR001841 | - | |
Glsi02g1222 | 535 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Glsi02g1222 | 535 | MobiDBLite | consensus disorder prediction | 140 | 162 | - | - | |
Glsi02g1222 | 535 | SUPERFAMILY | RING/U-box | 479 | 525 | - | - | |
Glsi02g1222 | 535 | Pfam | Ring finger domain | 479 | 522 | IPR001841 | - | |
Glsi02g1222 | 535 | FunFam | Putative RING zinc finger domain superfamily protein | 445 | 527 | - | - | |
Glsi02g1222 | 535 | MobiDBLite | consensus disorder prediction | 187 | 245 | - | - | |
Glsi02g1222 | 535 | MobiDBLite | consensus disorder prediction | 187 | 250 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Glsi02g1222 | Glsi-ChrGlsi02 | 8650048 | 8654260 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Glsi02g1222 | 387 | 526 | C3H Transcription Factor Family | AT5G45290 | 50.323 | 2.24e-39 | 149 |