Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1213 ATGTATCTGGATCTGACTCTTACTGCTGGCTTGAGGGAGTTCACTGACCTGCAACCAGTTGGTACTGAGCTTTTCAGGTATAATAGATTGATGTTTCCAGGCTTCCCTTCTCCTGAAGTTCAGTCAATAATGGTGGCGGTGCCTCATTGCTGGCCATCTTCCTCTAATGCCATAATTGCTGTTTCTTTGTGTGACAAAGATTATTACTATTTGCAATCTAAAGGTGGTGCTGTTGTGCACTTACCCCAACTTCCATTCAAAACCCTCAATGCTCACTCTGTTTTTATTCACCTGAAAGTTTTAGGGATACAATTTCCATATTTTATTGACTCCACCTCTTTTGTGGTGAACGTGGTCGATTATTACCTTATTGATGTGATTTGCAAGTTTTTCCACATATCTTTGTCACAAAATGTTTGTATTTTGCATAATGACACAGCCCATTTAACCTTCTTAAAGGTTGCTGATTTCACACTGATAAACGATAGGATCTTTATTGGAACCGCTATTGTGCATTACACTTTATCAACTCCTTGGAATCTACACCCCTTTAGAGAGATTTTGATTTTCTGTCAACCATTTGAGTTTGGATATTTTAATTCACGAAAGCTGTTATATGGTAAAGAAGCGAACTTACCTGAGAATGATCTCACTGCATCCCCTCTCCTTTCTTCCTCTTTCTGGTCTTTGGGAAAGGCTCTGCACGGATACCAGAAGCCTGCATGGTTGGAAGCTCTTTATACCCAAAAGTTCTTTGTGGGGTGCTCTTACCATGAAAACTCAAAGAAGAATGAGAAGAACATCTGCTGCTTGGATTGTTGCACCAGTATCTGCCCTCACTGCTTGCCTTACCATCGCTTCCATAGGCTTCTTCAGGTTCGCCGTTACGTTTATCATGACGTTGTCAGATTGGAAGATATTCAGAAACTCATAGACTGCTCCAGTGTTCAGGCTTATACAATCAATAGTGCCAAAGTGGTGTTCATCAAGAAGAGACCTCAAAACAGGCAATTCAAGGGGTCTGGAAACTACTGCAGTTCCTGTGATAGAAGTCTCCAAGAACCTTTCCTCCATTGCTCCCTTGGTTGCAAGGTGGATTTTCTGCTGGAACACTACAAGGATCTATCTCCCTATTTGAGGACATGCAAGTCGTTGCAGCTAAGTCCAGATTTTCTGATGCCACAAGAGATGGGAGAGGAGGAGATGACGAATGAGACAGCTCGTTCGACAATAGTGGACTGGGATGAACCAGTGATGAGCTCGAGTTCGGGGTCATCGGGGTCAGAGAATATGAGCATGGCATGCACAGAAATAGTGAGGAAGAAGAGAAGTGGGTGGAATGTGTGTGGGAGATTAATGGCCAATAAGGTTTCTGACGACGACATGGCTACTAGCATCAGTAGAAGAAAAGGCGTTCCCCATAGATCTCCTCTCTGTTAA 1440 0.4285 MYLDLTLTAGLREFTDLQPVGTELFRYNRLMFPGFPSPEVQSIMVAVPHCWPSSSNAIIAVSLCDKDYYYLQSKGGAVVHLPQLPFKTLNAHSVFIHLKVLGIQFPYFIDSTSFVVNVVDYYLIDVICKFFHISLSQNVCILHNDTAHLTFLKVADFTLINDRIFIGTAIVHYTLSTPWNLHPFREILIFCQPFEFGYFNSRKLLYGKEANLPENDLTASPLLSSSFWSLGKALHGYQKPAWLEALYTQKFFVGCSYHENSKKNEKNICCLDCCTSICPHCLPYHRFHRLLQVRRYVYHDVVRLEDIQKLIDCSSVQAYTINSAKVVFIKKRPQNRQFKGSGNYCSSCDRSLQEPFLHCSLGCKVDFLLEHYKDLSPYLRTCKSLQLSPDFLMPQEMGEEEMTNETARSTIVDWDEPVMSSSSGSSGSENMSMACTEIVRKKRSGWNVCGRLMANKVSDDDMATSISRRKGVPHRSPLC 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1213 479 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 238 478 - -
Glsi02g1213 479 Pfam PLATZ transcription factor 294 365 IPR006734 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1213 Glsi-ChrGlsi02 8573312 8583623 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Glsi02g1213 PLATZ 7.3e-26 No_clan