LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi02g1207	ATGGCCACTCTAAAAGGAGGCTCCAGACCTCCATGGGTGGGGCTTGGAGCTGCTGTTTGGGTTCAAATCGCTTCCGGAAATGCCTACAACTTCCCACTCTATTCTCACTCTCTCAAGTCGGTTCTGGGTTTCAACCAGCGCCAGGTCACCCTACTTGGTGTCGCCAACGATATTGGCGAGAATGTTGGCCTTCTTCCTGGTATTGCCTGCAACAAGTTCCCCCCTTGGGTTATTCTTTTGATTGGTGCTGTGGCCTCTTTCCTGGGTTACGGTGTTCTGTGGCTCGCTGTTAGTGAGACTGTGCAGTCGCTTCCTTACTGGTCGCTATGGATTGCCCTCGCTGTTGCCACCAACAGTAGTGCATGGTTAAGCACTGCAGTTCTTGTAACCAACATGAGAAATTTTCCTGTCAATAGAGGCACGGTTGCAGGAATTTTGAAAGGTTATGCGGGCCTCAGTGCTGCAGTTTTTACTGAAATTTACAGCATAGTGCTTCGTAACGCTTCTTCCAAGTTCTTATTGTTCCTTGCCATTGGTATTCCTGCTTTATGCTTCAGCGTGATGTTTCTTGTAAGGCCTTGTACTCCAGCTACTGGAGAAGATTCTGCAGAAAATTGTCATTTTCTTTTTATCCAAGGCTCTAGTGTGGTGTTAGGTTTATATCTTCTTGCAACTACTATATTTAGTAATGTTGTCACCTTAAGTGGTGAAGTTTCCTATGTTTTGGTCGCTGTGATGATTCTTCTTCTCATGGCTCCACTTGCAATTCCTGTAAAGATGACACTGTTTCCTAGAAAGGGCAGAAAATCAGAGACACCTGATCAACAAGTTGGATCTTCAGATTCAGGCTGTCTAGTTCAGGAAGACAAGGATGACAATACAGAACCCCTGTTACCATCTTCATCAGCAGCAACCCTTGGAAGTTTCTATGATACTGATGAGTCATCTGAAGTGGCTATGCTTCTTGCCGTGGGTGAAGGAGCAGTAAAGAAGAAGAGAAGACCCAAACGAGGGGAAGATTTTAAGTTTAGCGAGGCTATAATAAAGGCTGATTTCTGGCTTCTGTTCTTGGTTTTCTTTGTTGGGGTTGGATCTGGGGTTACTGTTCTCAATAATCTAGCTCAAATAGGCATTGCACAGGGTGTGGATGATACGACAAGCTTATTGTCACTTTTCAGCTTTTGCAATTTTGTGGGTCGACTTGGTGGAGGAGTTGTTTCTGAACACTTTGTTAGGACGAAAACAATCCCACGGACATTTGGGATGACATTTGCTCAGATAATCATGATCATGTCATATCTCCTGTTTGCATATGCTGTCAGTGGAACCCTTTTCCTTGCAGTTGCAATTCTTGGTGTCTGCTATGGCGTGCAATTTTCCATAATGATCCCCACTGTATCTGAGCTTTTTGGTTTGAAGCACTTTGGCATATTTTACAACTTCATGTCCTTGGGAAATCCTCTTGGTGCGTTCCTTTTCTCAGCTCTGCTAGCAGGGCATGTGTATGATAATGAGGCAGCAAAGCAGCATGGTCTAGGTCTGATTGCTTCTGGTGGCTCCTGCGTGGGCCCAAACTGCTTTAGGCTAACCTTTTTGGTTCTGGCTGGTTTGTGTGCTGTGGGAACCATCTTGAGCATCATCCTGAGTTTGAGGATAAAGCCCGTTTACCAAATGCTTTATGCTGGGGGTTCCTTCAGGCTGCCTCAAACCTCAAGTCACTAA	1722	0.4524	MATLKGGSRPPWVGLGAAVWVQIASGNAYNFPLYSHSLKSVLGFNQRQVTLLGVANDIGENVGLLPGIACNKFPPWVILLIGAVASFLGYGVLWLAVSETVQSLPYWSLWIALAVATNSSAWLSTAVLVTNMRNFPVNRGTVAGILKGYAGLSAAVFTEIYSIVLRNASSKFLLFLAIGIPALCFSVMFLVRPCTPATGEDSAENCHFLFIQGSSVVLGLYLLATTIFSNVVTLSGEVSYVLVAVMILLLMAPLAIPVKMTLFPRKGRKSETPDQQVGSSDSGCLVQEDKDDNTEPLLPSSSAATLGSFYDTDESSEVAMLLAVGEGAVKKKRRPKRGEDFKFSEAIIKADFWLLFLVFFVGVGSGVTVLNNLAQIGIAQGVDDTTSLLSLFSFCNFVGRLGGGVVSEHFVRTKTIPRTFGMTFAQIIMIMSYLLFAYAVSGTLFLAVAILGVCYGVQFSIMIPTVSELFGLKHFGIFYNFMSLGNPLGAFLFSALLAGHVYDNEAAKQHGLGLIASGGSCVGPNCFRLTFLVLAGLCAVGTILSIILSLRIKPVYQMLYAGGSFRLPQTSSH	573

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi02g1207	573	CDD	MFS_Mch1p_like	10	542	-	-
	Glsi02g1207	573	MobiDBLite	consensus disorder prediction	267	300	-	-
	Glsi02g1207	573	SUPERFAMILY	MFS general substrate transporter	12	195	IPR036259	-
	Glsi02g1207	573	Gene3D	MFS general substrate transporter like domains	348	557	IPR036259	-
	Glsi02g1207	573	Pfam	Nodulin-like	11	258	IPR010658	-
	Glsi02g1207	573	PANTHER	UNCHARACTERIZED NODULIN-LIKE PROTEIN	12	557	-	-
	Glsi02g1207	573	SUPERFAMILY	MFS general substrate transporter	223	554	IPR036259	-

Showing 1 to 7 of 7 entries

Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi02g1207	Glsi-ChrGlsi02	8512723	8516063	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi02g1207	5	573	Nodulin-like Gene Family	AT1G80530	57.618	0.0	682

Showing 1 to 1 of 1 entries