Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1113 ATGGCTTCCATACCGACTCTGTTCGTGCTGTTTGTAATGCTATTTGCAAATGAAGTTAGAGCTCAAAAAAACCATTCCAACATCATAAGCTTGGGTTCTTTACTCACCCCAAAAGGTAACTCTACTTCATGGGTCTCAGCCTCTGGTCTTTTTGCCTTTGGCTTTTACCAACAGGGTAATGGCTTTGCTATTGGGATATGGCTAATTGGCAAGTCCGAAAACATAATTGTCTGGACGGCTAACCGTGATAATCCCCCCCTTTCCTCTGATTCTTCATTGGAATTAACCGAAAGTGGTCAGCTGCTCCTTCAAACTGGGAAAGAGAGTCGAGAACTCGTTACTGGTTTACCAAAGCCTGCAGCTTCAGCATCTATGCTTGATTCTGGTAATTTTGTGCTTTACAATAAAGATTTGGATGTTCTCTGGCAAAGCTTTGATACCTCGACTGACACCATATTAGGAGGTCAGAATTTATCTTCTGGAGGTGAACTGGTCTCTGGTATGTCCAAGTCTGACCACTCAAGTGGACATTTCATTCTCAGTATGCAGAGAGATGGAAATCTTGTTGCCTACCCTGTAAACAGCTCAATGCAGCCAGATGATTCTTACTGGTCCTCGGCGACTTTCAACGTTTCTATTTATCTTAGTCTTGGCCGTGAAGGTTTTCTTTCGCTACAGAATGAGAATTCGGCATTTCGTGTTTTGAGCAATAGCACTAATCTCGGAAAGAACGCAACCTTAGTCTACCGTGCAACACTTGATGAAGATGGGATTTTTAGATTGTATGCACACCAATTTGAGAAGAATACTAGCTCGAGTGTGCAAATTGTGTGGTCGTCTTTGTCTACTCCATGTGAAGTCAAGGGGTTTTGTGGCTTCAACAGTTATTGCTCGATTAGGGGCGGCAATGCTATATGTCAGTGTTATCCTGGATTCGTGCCCGTTACACGAAGTAATATGTTCCTGGACTGCGAACAGAACTACAGCAAAGATGACTGTGATACCAGTGCTGACCCAATTATACTCTACAATGTTACTTCCTTGCAAGATATGTGGTGGAGTGATTATCCTTATTTGGTTTTTAAAATGGAGATGGAAGCTTGTGGGAAGTCTTGTCAGGAAGACTGTAATTGTGGGGCAGCGTTATACTCGAACGGAAATTGCAGGAAATATAAGCTTCCGCTTAGATATGGAATGATTCAAAATGCATCAGCCACGGCCCTTTTCAAGTTGCCTCTAGGAAACATCATTACACCAAACCAGACCATCTCATCTCCCAGGAAGCCGAAGGTTCTTGTTGATAACAAGAAAAAACTGATTCTGATTCTATTCTTGACATTGGGTTCGATTTCATTCTTTTGTTTGGTTTTTGCAATGTCTATTTTCTTTATCTACAGGCGTCGAGTTTATTCGTATACAAAGCTGTCTGGAAGTGCAAATCTGGGATTTACTGAGGAGTGTGGTTTACGATCATTTTCCTTTGATGAACTTCTAAATTCAACAGGGGGCTTCTCAGAAGAGGTTGGTAGAGGATATTTTGGAGCGGTTTATAGGGGAACAATAAGTGGAACTAACAGAAGGATTGCTGTCAAGAGACTAGATAAAGTTGTTGATGAAGGGGAGAGGGAAATTCAGGCTGAAATTACTGCAATTGCTCGAACTCATCACAGAAATTTGGTTCAGCTAATTGGTTTTTGTATTGATGGTTCCAGAAAGCTTCTTGTTTATGAATATATGAGCAACGGGTCTCTTGCAGATCTTCTCTTCAAGGCTGAGATGCGCCTGTCTTGGAAACAAAGAGTCAAAATCGCATTGGATGTGGCTAGAGGAGTTCTATATCTACACGAAGAGTGTGAAGTCTGTATTGTCCACTGCAATATTAAGCCCCAAAATATACTTATGGATGAAGCGTGGACAGCAAAAATATCTGATTTTGGGTTTGCAAGGTTATTAATTGCGGAACATTCAAGAACTACAACTGGAAATGAGATAACAAGTGGGTATTTGGCACCAGAAAGGCAGAAAGATGCATCAGTATCAGTGAAAGCTGATATCTACAGCTATGGCGTGGTACTATTGGAGATCATATGCTGCAGAAGCAGTATAGACATAAATGTTTCCTCGGAAGAGGAGATAATTCTTTCCAGTTGGGTATATAATTGCTTTGTAACGGGGGAATTGAATAAACTTGTTGCAGACGAAGATGTAGAATGGCAGACAATGGAAAGAATGGTGAAGGTGGGATTATGGTGTGTCCAGGAAGACCCGTCTTTGCGTCCTTCGATGAAGAATGTCATCTTGATGTTGGAAGGGTTGAAAAGCATTCCAATTCCTCCATCTCCAGCCCCTCTTGTTTGA 2358 0.4165 MASIPTLFVLFVMLFANEVRAQKNHSNIISLGSLLTPKGNSTSWVSASGLFAFGFYQQGNGFAIGIWLIGKSENIIVWTANRDNPPLSSDSSLELTESGQLLLQTGKESRELVTGLPKPAASASMLDSGNFVLYNKDLDVLWQSFDTSTDTILGGQNLSSGGELVSGMSKSDHSSGHFILSMQRDGNLVAYPVNSSMQPDDSYWSSATFNVSIYLSLGREGFLSLQNENSAFRVLSNSTNLGKNATLVYRATLDEDGIFRLYAHQFEKNTSSSVQIVWSSLSTPCEVKGFCGFNSYCSIRGGNAICQCYPGFVPVTRSNMFLDCEQNYSKDDCDTSADPIILYNVTSLQDMWWSDYPYLVFKMEMEACGKSCQEDCNCGAALYSNGNCRKYKLPLRYGMIQNASATALFKLPLGNIITPNQTISSPRKPKVLVDNKKKLILILFLTLGSISFFCLVFAMSIFFIYRRRVYSYTKLSGSANLGFTEECGLRSFSFDELLNSTGGFSEEVGRGYFGAVYRGTISGTNRRIAVKRLDKVVDEGEREIQAEITAIARTHHRNLVQLIGFCIDGSRKLLVYEYMSNGSLADLLFKAEMRLSWKQRVKIALDVARGVLYLHEECEVCIVHCNIKPQNILMDEAWTAKISDFGFARLLIAEHSRTTTGNEITSGYLAPERQKDASVSVKADIYSYGVVLLEIICCRSSIDINVSSEEEIILSSWVYNCFVTGELNKLVADEDVEWQTMERMVKVGLWCVQEDPSLRPSMKNVILMLEGLKSIPIPPSPAPLV 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1113 785 SUPERFAMILY Protein kinase-like (PK-like) 487 770 IPR011009 -
Glsi02g1113 785 PIRSF SRK 1 785 IPR024171 GO:0004674
Glsi02g1113 785 FunFam Serine/threonine-protein kinase 148 274 - -
Glsi02g1113 785 FunFam S-receptor-like serine/threonine-protein kinase 471 578 - -
Glsi02g1113 785 ProSiteProfiles Protein kinase domain profile. 502 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1113 785 ProSitePatterns Protein kinases ATP-binding region signature. 508 531 IPR017441 GO:0005524
Glsi02g1113 785 SMART blect_4 26 148 IPR001480 -
Glsi02g1113 785 SMART blect_4 149 284 IPR001480 -
Glsi02g1113 785 Gene3D - 149 282 IPR036426 -
Glsi02g1113 785 Gene3D - 24 147 IPR036426 -
Glsi02g1113 785 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 777 - -
Glsi02g1113 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 209 IPR036426 -
Glsi02g1113 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 266 IPR036426 -
Glsi02g1113 785 Pfam D-mannose binding lectin 76 158 IPR001480 -
Glsi02g1113 785 Gene3D Transferase(Phosphotransferase) domain 1 579 775 - -
Glsi02g1113 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 34 780 - -
Glsi02g1113 785 Pfam Protein kinase domain 505 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1113 785 Gene3D Phosphorylase Kinase; domain 1 471 578 - -
Glsi02g1113 785 Pfam S-locus glycoprotein domain 243 315 IPR000858 GO:0048544
Glsi02g1113 785 ProSiteProfiles Bulb-type lectin domain profile. 26 146 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1113 Glsi-ChrGlsi02 7569638 7571995 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1113 391 776 Receptor kinase-like Gene Family AT2G37710 34.257 4.74e-64 225
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi02g1113 Pkinase 2e-47 CL0016