Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi02g1111 ATGCTTGATTCTGGTAATTTTGTGCTTTACGGCAAAGATTTGGATATTCTCTGGCAAAGCTTTGTGATCCCGACTGACACCATATTAGGAGGTCAAAATTTATCTCCTGGATATGATCTGGTCTCTGGTGTGTCCAAGTCTGACCACTCAAGTGGACATTTCATTCTCAGAATGCAGGGAGATGGAAATATTGTTGCCTACCCTGTAAACAGCTTAATGAACCCGGAGGATTCTTACTGGTCCTTAGACACAGCGATGCCGATGTCCACTTCATATTCTGTTTCTCTCCGTCTTAATCGTGAAGGCTCTCTTTGGCTAGGGGATAATGAGAATTCCGCATATCGTGTTTTGGTCAATAGCACCAACCTCGGAAAGAACGCAACTTTAGTCTACCGTGCAGCTCTTGATGAAGATGGGATTTTTAGATTAAAGCTTCTTGTCTACGAATACATGAGCAGCGGGTCTCTTGCAGAACTTCTGTATAAGGCTGAGATGCGCCTATCATGGAAGCAAAGATTCAAAGTCGCATTGGATGTGGCAAGAGGAGTCCTATATCTACATGAAGAGTGTGAAGTCTGTATTGTCCATTGCAATATTAAGCCCCAAAATATACTTATGGATGAAGCTTGGACTGCAAAGATATCTGATTTCGGGCTTGCGAGGCTACTATTGCCGGAACATTCAAGAACTACAACTGGAAATGAGGTAACAAGTGGTTTCTTGGCACCAGAAAGGCAGAAAGATGCATCAGTATCAGTAAAAGTTGATATCTACAGTTATGGCGTATTATTAATGGAGATTATATGCTGCAGAAGAAGTATAGATGTGAAAGTTTCCTCAGAAGACGAGATAGTTCTATCAAGTTGGGTATATAAATGCTTCGTAGGAGGGGAATTGAATAAACTTGTTGTAGATGAAGATGTAGAATGGAGGACCATGGAAAGAATGGTGAAGGTGGGGTTGTGGTGTGTGCAGGAAGATCCATCTTTGCGTCCTTCGATGAAGAATGTCATCTTGATGTTGGAAGGGTTGAGAGATATTCCAACTCCACTTTCTCCATCTCCAGCCCCTTCCTTTTAA 1080 0.4213 MLDSGNFVLYGKDLDILWQSFVIPTDTILGGQNLSPGYDLVSGVSKSDHSSGHFILRMQGDGNIVAYPVNSLMNPEDSYWSLDTAMPMSTSYSVSLRLNREGSLWLGDNENSAYRVLVNSTNLGKNATLVYRAALDEDGIFRLKLLVYEYMSSGSLAELLYKAEMRLSWKQRFKVALDVARGVLYLHEECEVCIVHCNIKPQNILMDEAWTAKISDFGLARLLLPEHSRTTTGNEVTSGFLAPERQKDASVSVKVDIYSYGVLLMEIICCRRSIDVKVSSEDEIVLSSWVYKCFVGGELNKLVVDEDVEWRTMERMVKVGLWCVQEDPSLRPSMKNVILMLEGLRDIPTPLSPSPAPSF 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi02g1111 359 ProSiteProfiles Protein kinase domain profile. 53 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1111 359 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 143 - -
Glsi02g1111 359 Gene3D Transferase(Phosphotransferase) domain 1 151 349 - -
Glsi02g1111 359 SUPERFAMILY Protein kinase-like (PK-like) 130 342 IPR011009 -
Glsi02g1111 359 Gene3D - 22 123 IPR036426 -
Glsi02g1111 359 ProSiteProfiles Bulb-type lectin domain profile. 25 156 IPR001480 -
Glsi02g1111 359 Pfam Protein kinase domain 145 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi02g1111 359 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 151 349 - -
Glsi02g1111 359 SUPERFAMILY alpha-D-mannose-specific plant lectins 1 84 IPR036426 -
Glsi02g1111 359 FunFam Serine/threonine-protein kinase 24 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi02g1111 Glsi-ChrGlsi02 7542415 7543599 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi02g1111 144 343 Receptor kinase-like Gene Family AT1G60800 38.835 7.95e-43 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Glsi02g1111 Pkinase 1.9e-29 CL0016